DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10333 and ddx-17

DIOPT Version :10

Sequence 1:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster
Sequence 2:NP_001041134.1 Gene:ddx-17 / 179897 WormBaseID:WBGene00010260 Length:561 Species:Caenorhabditis elegans


Alignment Length:463 Identity:172/463 - (37%)
Similarity:259/463 - (55%) Gaps:57/463 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 DRHWSEKENDEMTERDW--------RIFREDY---------NVTIKGGRIPNPIRSWNESGFPKE 404
            |..|| .||....|:|:        |  ||.|         .||::|..:|.|:..:||:..|.:
 Worm    79 DVDWS-AENLTPIEKDFYHENAAVSR--REQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQ 140

  Fly   405 IIDIIDKVG-YKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSLPKIERLEDV 468
            |.:::  .| :::||.||..:.||.:..||||.:|:|||||||||::|.|..|......:|    
 Worm   141 IHELL--YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQR---- 199

  Fly   469 DQGPYAIIMAPTRELAQQIEEETTKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLI 533
            .:||..:::.||||||||::|.:..|...||::...:.||.|:..|...|..|.:||:||||||:
 Worm   200 GEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLL 264

  Fly   534 DVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTK 598
            |.|:|....:.:|:|:||||||||:||||||.::||     :..::||                 
 Worm   265 DFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKI-----IGQIRPD----------------- 307

  Fly   599 KKYRQTVMFTATMPPAVERLARTYLRRPATVYIGSVG-KPTERTEQIVYMMGENDKRKKLMEILS 662
               |||:||:||.|..|..||..:.:..|.:.:||:. .......|:|.::.|:.|:.||||:|:
 Worm   308 ---RQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLMELLN 369

  Fly   663 RKIDP---PVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATD 724
            ..::.   ..||||..|:.||.|.:.:.:.|:.:..:||.|.|.:|::.|...|:|...|::|||
 Worm   370 HIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATD 434

  Fly   725 VAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFVTKDDSALFYDLKQCVSASP 789
            ||.||:|:.|:..|||||.....|||.||||||||:.|.|.|.:|.|..:::...||.:.:..:.
 Worm   435 VAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAK 499

  Fly   790 VSTCPPEL 797
             .|.|..|
 Worm   500 -QTVPQAL 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10333NP_609888.2 DUF5401 <66..354 CDD:375164
SrmB 395..783 CDD:440279 153/392 (39%)
ddx-17NP_001041134.1 DEAD-like_helicase_N 77..538 CDD:475120 172/463 (37%)
Blue background indicates that the domain is not in the aligned region.

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