DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10333 and ddx-23

DIOPT Version :9

Sequence 1:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster
Sequence 2:NP_498260.2 Gene:ddx-23 / 175818 WormBaseID:WBGene00017162 Length:730 Species:Caenorhabditis elegans


Alignment Length:728 Identity:450/728 - (61%)
Similarity:554/728 - (76%) Gaps:36/728 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 EPLSLEELLDKKKREEEARSKPVFLTKEQRALEAIKRRQEEV----ERQRAAHDAAREQMAAASK 187
            ||.||||||:||||||:..:||.||:|.:||..|:|||:|||    |.|:.|.: ||:......|
 Worm     4 EPPSLEELLEKKKREEDELAKPKFLSKAERAALALKRREEEVAKLRETQKQAEE-ARKNWGRTEK 67

  Fly   188 VS-------ISMGTAMASGAPPPAIVAPPPKPDRRERGGGRDRGDRI-----------------D 228
            .|       :..|...........  ....:.|||||.|.|||..|.                 |
 Worm    68 TSDDRRDRGLDRGNDRDRDRERER--DRDRRRDRRERSGSRDRRRRSRSRDRDGGRRRDRSRSRD 130

  Fly   229 RGERGDDKRAEDLTHKDKEKEL----EAIRERYLGIIK-KKRRVRRLNDRKFVFDWDAGEDTSID 288
            |.:|.||::.:.....|.|:::    :|:::||||..| ||:|.|||:::|||||||||||||.|
 Worm   131 RRDRNDDRKRDRNEDSDNEEDVSKMADAVKDRYLGKQKEKKKRGRRLHEKKFVFDWDAGEDTSQD 195

  Fly   289 YNNLYKERHHVQFFGRGNVAGIDIKEQKRTQSKFYGDLLEKRRTEAEKEQEKVRLKKMKRKEDKQ 353
            ||.||:.||.:||||||:|||.|:..||:.::.||.:::|.|||..|||||..||:|..:||.|.
 Worm   196 YNKLYQSRHEIQFFGRGSVAGTDVNAQKKEKNSFYQEMMENRRTVDEKEQEMHRLEKELKKEKKV 260

  Fly   354 KWDDRHWSEKENDEMTERDWRIFREDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPT 418
            ..|||||..||..||::|||||||||:|::|||||:|.|:|:|.|:|||.|:...:.::||.|||
 Worm   261 AHDDRHWRMKELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPT 325

  Fly   419 PIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTREL 483
            |||||||||||||||:|||||||||||.|||:|||.||.||||:||.|..|.|||||||||||||
 Worm   326 PIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTREL 390

  Fly   484 AQQIEEETTKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTY 548
            ||||||||.|||:.|||:||.|:||.|||:||.:||:|.|:||||||||:||||||||:||||||
 Worm   391 AQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTY 455

  Fly   549 IVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATMPP 613
            ::|||||||:||||||||||:|||||.||:|.||:|.::|..||:.|.|::||||||||||||..
 Worm   456 VILDEADRMLDMGFEPDVQKVLEYMPDTNMKKDTDEFDNEEALMKGFSTREKYRQTVMFTATMSS 520

  Fly   614 AVERLARTYLRRPATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEILSRKIDPPVIIFVNQKKG 678
            |:|||||.||||||.|:|||.||||||.||:|||:.|:.|||||:|:|..:..||:|||||||||
 Worm   521 AIERLARQYLRRPAVVHIGSAGKPTERVEQVVYMVPEDRKRKKLVEVLESQFQPPIIIFVNQKKG 585

  Fly   679 ADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDM 743
            ||:|:|||.|||:....|||||||:||||||.|||.|..||||||||||||||:||||||:||||
 Worm   586 ADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDM 650

  Fly   744 AKTIEDYTHRIGRTGRAGKTGCAISFVTKDDSALFYDLKQCVSASPVSTCPPELMNHPEAQHKPG 808
            ||:||||||||||||||||.|.||:|:|.||:|:::||||.:..||||:|||||.|||:||.|||
 Worm   651 AKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFDLKQVLVESPVSSCPPELANHPDAQSKPG 715

  Fly   809 TVVTKKRREEKIF 821
            ...:|||::|.:|
 Worm   716 VFTSKKRQDETLF 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10333NP_609888.2 DEADc 396..629 CDD:238167 173/232 (75%)
DEXDc 409..632 CDD:214692 168/222 (76%)
Helicase_C 651..761 CDD:278689 83/109 (76%)
ddx-23NP_498260.2 DEADc 303..533 CDD:238167 170/229 (74%)
DEXDc 316..551 CDD:214692 178/234 (76%)
HELICc 552..676 CDD:238034 93/123 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167987
Domainoid 1 1.000 317 1.000 Domainoid score I683
eggNOG 1 0.900 - - E2759_KOG0333
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3542
Inparanoid 1 1.050 886 1.000 Inparanoid score I199
Isobase 1 0.950 - 0 Normalized mean entropy S825
OMA 1 1.010 - - QHG55082
OrthoDB 1 1.010 - - D183201at33208
OrthoFinder 1 1.000 - - FOG0003506
OrthoInspector 1 1.000 - - oto18102
orthoMCL 1 0.900 - - OOG6_102378
Panther 1 1.100 - - LDO PTHR47958
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R991
SonicParanoid 1 1.000 - - X3074
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

Return to query results.
Submit another query.