DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10333 and vbh-1

DIOPT Version :10

Sequence 1:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster
Sequence 2:NP_001021793.1 Gene:vbh-1 / 171888 WormBaseID:WBGene00006888 Length:660 Species:Caenorhabditis elegans


Alignment Length:443 Identity:174/443 - (39%)
Similarity:252/443 - (56%) Gaps:39/443 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   378 EDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGS 442
            |:..|.:.|..:|..|..:||:||...:::.:::.||.:|||:|:.:||..|.|||::..|:|||
 Worm   123 ENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGS 187

  Fly   443 GKTLAFLIPLLSWI-QSLPKIERLEDVDQG-----PYAIIMAPTRELAQQIEEETTKFGQPLGIR 501
            |||.|||:|::..| ...|.:.:......|     |.|::::||||||.||.:|.|||.....|:
 Worm   188 GKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQ 252

  Fly   502 TVVVVGGLSRE---EQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFE 563
            |.::.||  ||   :|..|||.|..|:|||||||||::|..::.|..|.|:||||||||:|||||
 Worm   253 TAILYGG--RENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFE 315

  Fly   564 PDVQKIL-EYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATMPPAVERLARTYLR-RP 626
            |.::||: :.||                       .|..|.|.||:||.|..::.||:.:|: ..
 Worm   316 PQIRKIVGQGMP-----------------------PKTARTTAMFSATFPKEIQVLAKDFLKDNY 357

  Fly   627 ATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEIL-SRKIDPPVIIFVNQKKGADVLAKGLEKLG 690
            ..:.:|.||..:|..||.:..:.|.:||..||||| :...:..|::||..|:||:.||..|.:..
 Worm   358 IFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQ 422

  Fly   691 YNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDMAKTIEDYTHRIG 755
            ..|.::||...|.:||..|...:||...|||||.||.||:||.:|..|||||:....::|.||||
 Worm   423 IRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIG 487

  Fly   756 RTGRAGKTGCAISFVTKDDSALFYDLKQCVSASPVSTCPPELMNHPEAQHKPG 808
            ||||.|..|.|.||....:..:..|||..:..|....  ||.::...|:.:.|
 Worm   488 RTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEV--PEWLHQVAAEGRIG 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10333NP_609888.2 DUF5401 <66..354 CDD:375164
SrmB 395..783 CDD:440279 163/399 (41%)
vbh-1NP_001021793.1 SrmB 141..526 CDD:440279 165/411 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.