DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10333 and Ddx4

DIOPT Version :10

Sequence 1:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster
Sequence 2:XP_011242920.1 Gene:Ddx4 / 13206 MGIID:102670 Length:738 Species:Mus musculus


Alignment Length:597 Identity:194/597 - (32%)
Similarity:293/597 - (49%) Gaps:87/597 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 ERGGGRDRGDR-----IDRGERGDDKRAE---DLTHKDKEKELEAIRERYLGIIKKKRRVRRLND 272
            :|||.:|..|.     ..||.||..:...   .|...:.|.:.:...:|..|:...::       
Mouse   135 KRGGCQDGNDSEASGPFRRGGRGSFRGCRGGFGLGRPNSESDQDQGTQRGGGLFGSRK------- 192

  Fly   273 RKFVFDWDAGEDT---SIDYNNLYKERHHVQFFGRGNVAGIDIKEQKRTQSKFYGDLLEKRRTE- 333
                   .|..|:   .....:.|:.|   ...|||...|::  |:..|.|   |....|..|| 
Mouse   193 -------PAASDSVQCLTGNGDTYQSR---SGSGRGGYKGLN--EEVVTGS---GKNSWKSETEG 242

  Fly   334 ---AEKEQEKVRLKKMKRKEDKQKWDDRHWSEKENDEMTERDWRIFREDYN---VTIKGGRIPNP 392
               ::.:..||........||            |:.........|..:.|:   |.:.|...|..
Mouse   243 GESSDSQGPKVTYIPPPPPED------------EDSIFAHYQTGINFDKYDTILVEVSGHDAPPA 295

  Fly   393 IRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQ 457
            |.::.|:...:.:.:.|.|.||.:.||:|:.:|||.|..||::..|:||||||.|||:|:|:.:.
Mouse   296 ILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMM 360

  Fly   458 ----SLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQPLGIRTVVVVGGLSREEQGFRL 518
                :..:.:.|::    |..||:||||||..||..|..||.....:|.||:.||........::
Mouse   361 RDGITASRFKELQE----PECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSVRQI 421

  Fly   519 RLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEY--MPVTNLKPD 581
            ..||.|:.||||||:|::....:.|.|..|:||||||||:||||.|:::|::..  ||       
Mouse   422 VQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMP------- 479

  Fly   582 TEEAEDETKLMENFYTKKKYRQTVMFTATMPPAVERLARTYLRRP-ATVYIGSVGKPTERTEQIV 645
                            .|:.|||::|:||.|..::|||..:|:.. ..|.:|.||......:|.:
Mouse   480 ----------------SKEQRQTLLFSATFPEEIQRLAGDFLKSSYLFVAVGQVGGACRDVQQTI 528

  Fly   646 YMMGENDKRKKLMEILSRKIDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALA 710
            ..:|:..||:||:|||....|...::||..||.||.:|..|.:...::.::||.:.|.:||.||.
Mouse   529 LQVGQYSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 593

  Fly   711 ALKSGAKDILVATDVAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFV-TKDD 774
            ..:.|...:||||.||.||:||::|..|||:|:..||::|.||||||||.|.||.||||. |..|
Mouse   594 DFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTDSD 658

  Fly   775 SALFYDLKQCVS 786
            :.|...|.:.:|
Mouse   659 NHLAQPLVKVLS 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10333NP_609888.2 DUF5401 <66..354 CDD:375164 32/152 (21%)
SrmB 395..783 CDD:440279 154/395 (39%)
Ddx4XP_011242920.1 DEADc_DDX4 266..518 CDD:350810 95/278 (34%)
SF2_C_DEAD 524..653 CDD:350174 58/128 (45%)

Return to query results.
Submit another query.