DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10333 and ddx41

DIOPT Version :9

Sequence 1:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster
Sequence 2:XP_012815277.1 Gene:ddx41 / 100491281 XenbaseID:XB-GENE-967537 Length:621 Species:Xenopus tropicalis


Alignment Length:613 Identity:209/613 - (34%)
Similarity:312/613 - (50%) Gaps:103/613 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 GDDKRA----EDLTHKDKE--------KELEAIRERYLGIIKKKRRVRRLNDRKFVFDWDAGEDT 285
            |:.||.    |||...|.|        |:.......||.:..:||.:.|   ||.|.: :..:|:
 Frog     5 GERKRVHAEEEDLELSDDEDYVPYVPLKQRRQEMSLYLCVQLQKRMLIR---RKGVLE-EEQKDS 65

  Fly   286 SIDYNNLYKERHHVQFFGRGNVAGID----IKEQKRTQSKFYGDLLEKRRTEAEKEQEKV----R 342
            ..|:..   :...:....|.||:.:|    :||:...:.:   ...||:..|.||..|.|    .
 Frog    66 GSDHRG---DEDDIPLGPRSNVSLLDQHQHLKEKAEARKE---SAKEKQLKEEEKILESVTEGRA 124

  Fly   343 LKKMKRKEDKQKWDD---------RH---WSEKENDEMTERDWRIFREDYNVTIKGGRIPNPIRS 395
            |..:|.......:||         ||   .||..:|.:        |..|::.::|.|||.||:|
 Frog   125 LMSVKEMAKGITYDDPIKTSWKPPRHILEMSEARHDRV--------RSKYHILVEGERIPQPIKS 181

  Fly   396 WNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWI---- 456
            :.|..||..|:..:.|.|...|||||.|.||..|..||:||:|.|||||||.|.:|::.:.    
 Frog   182 FKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 246

  Fly   457 QSLPKIERLEDVDQGPYAIIMAPTRELAQQ-----------IEEETTKFGQPLGIRTVVVVGGLS 510
            :.||..:|     :|||.:|:.|:||||:|           ::|:....     :||.:.:||:|
 Frog   247 KRLPFAKR-----EGPYGLIICPSRELARQTHSIIEYYCHLLQEDNFPH-----LRTALCIGGMS 301

  Fly   511 REEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPV 575
            .:||...::.|..:::||||||:|:|:.:.:.|:.|.|:.|||||||||||||.|::.|..|.  
 Frog   302 VKEQMETIKQGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEEDIRTIFSYF-- 364

  Fly   576 TNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATMPPAVERLARTYLRRPATVYIGSVGKPTER 640
                                   |..|||::|:||||..::..|::.|.:|.|:.:|..|..:..
 Frog   365 -----------------------KGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLD 406

  Fly   641 TEQIVYMMGENDKRKKLMEILSRKIDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQR 705
            ..|.|..:.|..|...|:|.| :|..|||:||..:|...|.:.:.|...|..:..:||||.||:|
 Frog   407 VIQEVEYVKEEAKMVYLLECL-QKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEER 470

  Fly   706 EYALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFV 770
            ..|:.|.:...||:|||||||.:|:|...:..|:||||.:.||:|.||||||||:|.||.|.:|:
 Frog   471 TKAIEAFREEKKDVLVATDVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGNTGIATTFI 535

  Fly   771 TKD-DSALFYDLKQCVSASPVSTCPPEL 797
            .|. |.::..|||..:..:. ...||.|
 Frog   536 NKSCDESVLMDLKALLMEAK-QRVPPVL 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10333NP_609888.2 DEADc 396..629 CDD:238167 90/247 (36%)
DEXDc 409..632 CDD:214692 87/237 (37%)
Helicase_C 651..761 CDD:278689 50/109 (46%)
ddx41XP_012815277.1 DEADc 182..396 CDD:238167 91/248 (37%)
DEXDc 195..408 CDD:214692 89/247 (36%)
Helicase_C 417..526 CDD:278689 50/109 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D183201at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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