DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10333 and ddx42

DIOPT Version :10

Sequence 1:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster
Sequence 2:XP_002935570.1 Gene:ddx42 / 100135374 XenbaseID:XB-GENE-972670 Length:943 Species:Xenopus tropicalis


Alignment Length:673 Identity:205/673 - (30%)
Similarity:314/673 - (46%) Gaps:141/673 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 RQEEVERQRAAHDAAREQMAAASKVSISMGTAM--------------------------ASGAPP 202
            ::||.:..:|:|.|.:   ::|:|...|....:                          :|....
 Frog    25 KKEEPKLPQASHSAFQ---SSAAKFGSSTSNQLPSFYKIGSKRANFDEENAYFDDEEEDSSNVDL 86

  Fly   203 PAIVAPPPKPDRRERGGGRDRGDRIDRGE----RGDDKRAED---LTHKDKEKE-LEAIRERYLG 259
            |.|.| ...|.|::.....|.....|..|    ..:|:.|:|   |..:||||: ...||:    
 Frog    87 PYIPA-ENSPTRQQLHSKADSDSEEDPLEAFMAEVEDQAAKDMRKLEERDKEKKNARGIRD---- 146

  Fly   260 IIKKKRRVRRLNDRKFVFDWDAGEDTSIDYNNLY--KERHHVQFFGRGN------------VAGI 310
                  .:...:|::..|.:.|...|:    .|.  :|..::::...||            :..|
 Frog   147 ------DIEEEDDQEAYFRYMAENPTA----GLVPEEEEDNLEYDSDGNPIAPTTKRIIDPLPPI 201

  Fly   311 DIKEQKRT--QSKFYGDLLEKRRTEAEKEQEKVRLKKMKRKEDKQKWDDRHWSEKENDEMTERDW 373
            |..|.:.|  :..||            :|.|::                   :.:...::||   
 Frog   202 DHTEIEYTPFEKNFY------------EEHEEI-------------------TSQTPQQITE--- 232

  Fly   374 RIFREDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVA 438
              .|...|:.:.|...|....|:...||.::::..|.|..|.:|||||.|.:|:.|..||:||:|
 Frog   233 --LRHKLNLRVSGAAPPRLCSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIA 295

  Fly   439 ETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQPLGIRTV 503
            :||||||.||:.|:|..|....:::    ...||.|:|:.|||||.|||..|..:||:...:|:|
 Frog   296 KTGSGKTAAFIWPILVHIMDQKELQ----PGDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSV 356

  Fly   504 VVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQK 568
            .|.||.|..||...|:.|.|||:.|||||||.::.:...|.:.||:|.||||||.|||||..|:.
 Frog   357 AVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRS 421

  Fly   569 ILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATMPPAVERLARTYLRRPATVYIGS 633
            |     ..:::||                    |||::|:||....:|:|||..|..|..|..|.
 Frog   422 I-----ANHVRPD--------------------RQTLLFSATFRKKIEKLARDILVDPIRVVQGD 461

  Fly   634 VGKPTERTEQIVYMMGENDKR-----KKLMEILSRKIDPPVIIFVNQKKGADVLAKGLEKLGYNS 693
            :|:..|...|:|.::....::     ::|:|..|   ...|:|||.:|..|:.||..|.:..:..
 Frog   462 IGEANEDITQVVEILPSGPEKWTWLTRRLVEFTS---TGSVLIFVTKKANAEELANNLRQDDHPL 523

  Fly   694 CTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTG 758
            ..|||...|.:|...::..|..:..:|||||||.||:||..:..|||||:|:.|:.:||||||||
 Frog   524 GLLHGDMDQSERNKVISDFKKKSIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTG 588

  Fly   759 RAGKTGCAISFVTKDDSALFYDL 781
            |||:.|.|.:.:|..||....||
 Frog   589 RAGEKGVAHTLLTPKDSNFAGDL 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10333NP_609888.2 DUF5401 <66..354 CDD:375164 43/239 (18%)
SrmB 395..783 CDD:440279 156/392 (40%)
ddx42XP_002935570.1 SrmB 252..662 CDD:440279 156/392 (40%)
PRK12678 733..>940 CDD:237171
Blue background indicates that the domain is not in the aligned region.

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