DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10413 and slc12a5b

DIOPT Version :9

Sequence 1:NP_001286048.1 Gene:CG10413 / 35111 FlyBaseID:FBgn0032689 Length:941 Species:Drosophila melanogaster
Sequence 2:XP_009302423.1 Gene:slc12a5b / 797331 ZFINID:ZDB-GENE-080707-1 Length:1126 Species:Danio rerio


Alignment Length:1152 Identity:271/1152 - (23%)
Similarity:462/1152 - (40%) Gaps:298/1152 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EQETAPIANSRSGRTGSVFRSFGSLFGGSQNSGDRPHTPQDGDGYVEFGMQDPDRSGRTLGTFAG 70
            |.:|:|:.:|..    |...::.:|..||:...:    .::.:...:...|.|     .:||..|
Zfish    54 EMDTSPMVSSLL----SSLANYSNLTQGSKEHEE----AENNEEARKKAAQAP-----RMGTIMG 105

  Fly    71 VFSPVALSMFSALVFIRVGYIVGNAGLYVTLLQFLIAYGILLFTVASVCAISTNGAIEGGGVYFM 135
            |:.|...::...::|:|:.::||..|:..|.....:.....:.|..|:.||:|||.:..||.|:|
Zfish   106 VYLPCLQNILGVILFLRMTWLVGVGGVLGTFTIVFMCCSTTMLTAISMSAIATNGVVPAGGSYYM 170

  Fly   136 ISRTLGLEFGGSIGTLFFFANVVGSAMAISGCTEGIMDNFGPRGHFVSGDSHLPDGDWWRFLTSS 200
            |||:||.||||::|..||.......||.|.||.|.::....|.......:. |...:....|.::
Zfish   171 ISRSLGPEFGGAVGICFFLGTTFAGAMYILGCIEILLIYIVPSAAIFKMEG-LEGSEAEAALLNN 234

  Fly   201 M------INTLQLLVCLVGAALFAKTSVIILATVTVCLFATY------------FSFLFVGATNN 247
            |      :.|...:|..||.....|.:::.||.|.:.:.|.|            |....:|  |.
Zfish   235 MRVYGTIVLTFMAIVVFVGVKYVNKLALVFLACVILSILAIYAGVIKTSFDPPDFPVCVLG--NR 297

  Fly   248 TIPVPGDNILSNT--------TT-----FLDYTGLNAT----------------------TLRDN 277
            |:.....:|.:.|        ||     |.|...||||                      .|.:|
Zfish   298 TLVSKAYDICAKTIERGNATITTKLWRSFCDSEFLNATCDEYFVNNNISQIQGIPGVTSGILAEN 362

  Fly   278 LGSHYGR------------------DYTSNGKQV--DFSTTF----GVLFSGVTGIMAGANMSGE 318
            |.|.|..                  ..|::.:.|  |.::.|    |:.|..|||||||:|.||:
Zfish   363 LFSGYMEKNSVLEKRGLQAVQDPELPVTNSNRYVLADITSFFTLLVGIYFPSVTGIMAGSNRSGD 427

  Fly   319 LKNPSKSIPYGTLSAVAFTFVSYIILSFLMSCTTPYFTMQNNYLFLMPVNL------WP-PFTAI 376
            |::..||||.||:.|:..|.:.|:....|.........:::.:...:..||      || |:..:
Zfish   428 LQDAQKSIPVGTILAITTTSIIYMSSVILFGACVDGVVLRDKFGEGVSGNLVIGTLAWPSPWVIV 492

  Fly   377 -GILTATFSTSLSNLIGSSRILEALSKD------QVFGSLLNFVIHGTWKGNPIAAVAVSWCLVE 434
             |...:|....|.:|.|:.|:|:|:::|      :|||       ||...|.|..|:.::.|:.|
Zfish   493 FGSFFSTCGAGLQSLTGAPRLLQAIARDGIIPFLRVFG-------HGKANGEPTWALLLTACICE 550

  Fly   435 CILLIGSFNIIAQINSVLFMLSYLATNLACLGIELTGAPNFRPLFKFFTWHTCLVGLLGTLIMMF 499
            ..:||.|.:.:|.|.|:.|::.|:..||||....|...||:||.|||:.|...|:|:...|.:||
Zfish   551 SGILIASLDAVAPILSMFFLMCYMFVNLACALQTLLRTPNWRPRFKFYHWALSLLGMSLCLTLMF 615

  Fly   500 VINFIYASSCIIL--CLILVIALHLFSPATQAAQWGSISQALMFHQVRKYLLMLDPRKDHVKFWR 562
            :.::.||...:::  |:...|.   |..|.:  :||...:.:.....|..|:.|:....|.|.||
Zfish   616 LCSWYYAIVAMVIAGCIYKYIE---FCGAEK--EWGDGIRGISLSAARFALMRLEEGPPHTKNWR 675

  Fly   563 PQILLL--------VSSPRSCCPLVDFVNDLKK-SGLYIIGHVKLGDFKGIE--DAEDNQQWWSF 616
            ||||:|        |..||    |:...:.||. .||.|:|....|.:...:  ..:.:|.....
Zfish   676 PQILVLTTLDGEQNVEQPR----LLSLTSQLKAGKGLTIVGACIEGTYLNNQPKTQKADQSLRKL 736

  Fly   617 LDHMRVKAFTEVTLSRSIREGVQHLIRLSGIGAMKPNTIILGFYDSEAPRDFFQNGSSPYKTDDF 681
            ::..:||.|::|.:|.::|:...|||:..|:|.::.||:::.|     |:::.|           
Zfish   737 MEVEKVKGFSQVVISSNLRDATSHLIQAGGLGGLRHNTVLVSF-----PKNWKQ----------- 785

  Fly   682 NNGEIQNFPIRRDGDPKQFQIQEYVQILCDTLRMKKNLCLCRNFQRLDKNFISMSKHVKYIDVWP 746
                          ..:..:.:.:::::.:|......|.:.:|......|....::  .:||||.
Zfish   786 --------------AEEHHRCRNFIEVVRETTAGHMALLVPKNISAYPSNGERFTE--GHIDVWW 834

  Fly   747 INIFNPTSGDPFDMVSLFMMQLAVIMLAKWKHLRVRIFLCEANDERTVG------TF------DT 799
            |    ...|....::...:.|..|     |:..::|||.....|:.::.      ||      |.
Zfish   835 I----VHDGGMLMLLPFLLRQHKV-----WRKCKMRIFTVAQMDDNSIQMKKDLMTFLYHLRLDA 890

  Fly   800 QTPQMEIFSK----------MKLEQS---LKELRITADIVEIQEWSRDTDFSR------------ 839
            ....:|:...          :.:||.   |||:.:|.:..| :|....||.||            
Zfish   891 AVEVVEMLDNDISAYTYEKTLMMEQRSQILKEMHLTKNERE-REIQSITDVSRGSIRRKNPSNLH 954

  Fly   840 --------------------------HAR------------------------------------ 842
                                      |.|                                    
Zfish   955 PQRSIAEESVAGSGEEKPEEESVRVSHPRQVQLIQGKNATPTPTSPTSPTAPTPATMSPGEEIQM 1019

  Fly   843 TLKQFTAQADNVVLEDDDEVGE--------ETLNRS----LLYMQRANQIIRERSDQTALSFIYL 895
            |....|.:|:|..:.:.:.:.:        |.||:|    :.:.|:.|::|.::|.:..|..:.:
Zfish  1020 TWTDDTEKANNPAVANPENIKDMFNMKPEWENLNQSNVRRMHHAQKLNEVIVKKSQEAKLVLLNM 1084

  Fly   896 AAPPKLSAPDFAQRSASYMELLTELTADLPPTILVHG----VSTVTS 938
            ..||:....:     .:|||.|..||..|...:||.|    |.|:.|
Zfish  1085 PGPPRNRTGE-----ENYMEFLEVLTEGLNRVLLVRGGGREVITIYS 1126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10413NP_001286048.1 2a30 22..932 CDD:273347 263/1124 (23%)
SLC12 577..932 CDD:281515 84/468 (18%)
slc12a5bXP_009302423.1 2a30 24..1126 CDD:273347 270/1150 (23%)
SLC5-6-like_sbd 148..>288 CDD:294310 43/140 (31%)
SLC12 693..1126 CDD:281515 89/483 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594122
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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