DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10413 and slc12a7a

DIOPT Version :9

Sequence 1:NP_001286048.1 Gene:CG10413 / 35111 FlyBaseID:FBgn0032689 Length:941 Species:Drosophila melanogaster
Sequence 2:XP_005171306.1 Gene:slc12a7a / 558214 ZFINID:ZDB-GENE-070912-696 Length:1117 Species:Danio rerio


Alignment Length:1068 Identity:276/1068 - (25%)
Similarity:439/1068 - (41%) Gaps:236/1068 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 EFGMQDPDRSGRTLGTFAGVFSPVALSMFSALVFIRVGYIVGNAGLYVTLLQFLIAYGILLFTVA 116
            |.|:|....:|..:|||.|||.|...::...::|:|:.:|||.||:...|....:.....:.|..
Zfish   105 EDGIQRVTVNGPQMGTFIGVFLPCTQNILGVILFLRLTWIVGTAGILEALAVVFMCCACTMLTAI 169

  Fly   117 SVCAISTNGAIEGGGVYFMISRTLGLEFGGSIGTLFFFANVVGSAMAISGCTEGIMDNFGPRGHF 181
            |:.||:|||.:..||.|:||||.||.|.||::|..|:.......:|.|.|..|..:....|....
Zfish   170 SMSAIATNGVVPAGGSYYMISRALGPEIGGAVGLCFYLGTTFAGSMYILGTMEIFLTYIMPSAAV 234

  Fly   182 VSGDSHLPDGDWWRFLTSSMINTLQL----------LVCLVGAALFAKTSVIILATVTVCLFATY 236
            ...::  |.|         |.|.:::          ||..||.....|.|::.|:.|.:.:.|.|
Zfish   235 FEANN--PTG---------MQNNMRIYGTCCLAIMTLVVFVGVKYVNKLSLVFLSCVVLSIMAIY 288

  Fly   237 ------------FSFLFVGATNNTIPVPG--------------DNILSNTT--------TFLDYT 267
                        |:...:|  |.|:...|              |||...|.        |..:|.
Zfish   289 AGVIQSAIKPSSFTICLLG--NRTLQHFGKSGKFDKCMKTEVIDNITKPTELWYHFCNGTCDEYF 351

  Fly   268 GLNATT------------LRDNLGSHYG------------------------RDYTSNGKQVDFS 296
            .||..|            :.:||.|.||                        ..|..|.....|:
Zfish   352 NLNELTEISAVPGLLSNAITENLWSRYGEYRTTVEKENITSEAALSSEPEVLNSYVVNDMATFFT 416

  Fly   297 TTFGVLFSGVTGIMAGANMSGELKNPSKSIPYGTLSAVAFTFVSYIILSFLMSCTTPYFTMQNNY 361
            ...|:.|..|||||||:|.||:|::|.:|||.||:.|:|.|...||....|.........:::.|
Zfish   417 LLVGIYFPSVTGIMAGSNRSGDLRDPQRSIPTGTIMAIATTSFIYISCVVLFGACFEGVVLRDKY 481

  Fly   362 LFLMPVNL------WP-PFT-AIGILTATFSTSLSNLIGSSRILEALSKD------QVFGSLLNF 412
            ...:..||      || |:. .||...:.....|.:|.|:.|||:|:::|      ||||     
Zfish   482 GDSVNKNLVVATLAWPSPWVIVIGSFFSCCGAGLQSLTGAPRILQAIARDGIMPFLQVFG----- 541

  Fly   413 VIHGTWKGNPIAAVAVSWCLVECILLIGSFNIIAQINSVLFMLSYLATNLACLGIELTGAPNFRP 477
              .....|.|..|:.::..:.|..:||.|.:.:|.|.|:.|::.||..||||....|...||:||
Zfish   542 --RSKSGGEPTWALLLTAAICEIGILIASLDAVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRP 604

  Fly   478 LFKFFTWHTCLVGLLGTLIMMFVINFIYASSCIIL--CLILVIALHLFSPATQAAQWGSISQALM 540
            .|||:.|....:|:..:|.:|||.::.||...|::  |:...|.   :..|.:  :||...:.|.
Zfish   605 RFKFYHWSLSFLGMSLSLSLMFVSSWYYALVVILIAGCIYKYIE---YRGAVK--EWGDGLRGLS 664

  Fly   541 FHQVRKYLLMLDPRKDHVKFWRPQILLL--------VSSPRSCCPLVDFVNDLKK-SGLYIIGHV 596
            .:..|..|:.|:..:.|.|.||||:|:|        |..||    |:.|.:.||. .||.|:..|
Zfish   665 LNAARYALIKLEEAQPHTKNWRPQLLVLMKLDTDLTVKHPR----LLSFTSQLKAGKGLTIVCSV 725

  Fly   597 KLGDF--KGIEDAEDNQQWWSFLDHMRVKAFTEVTLSRSIREGVQHLIRLSGIGAMKPNTIILGF 659
            ..|.|  :|.:.....|...:.:...:.|.|..|.:|.:.|:|..|||:.:|:|.||.|.:::.:
Zfish   726 LEGTFMVRGADAKLAEQNIKAAMAKEKTKGFCHVVVSSNQRDGFSHLIQSAGLGGMKHNAVLVAW 790

  Fly   660 YDSEAPRDFFQNGSS-----------------------------PYKTDDFNNGEIQNFPIRRDG 695
                 |.::.|..||                             |...|....|.|..:.|..||
Zfish   791 -----PANWKQAESSLSWKNFIETVRETTAAHQALLVAKNVDTFPSNQDRLAEGTIDVWWIVHDG 850

  Fly   696 DPKQFQIQEYVQILCDTLRMKK--NLCLCRNF--QRLDKNFISMSK-------HVKYIDVWPINI 749
            .        .:.:|...||..|  ..|..|.|  .::|.|.|.|.|       |:: :|. .:.:
Zfish   851 G--------LLMLLPFLLRQHKVWRKCKMRIFTVAQMDDNSIQMKKDLQMFLYHLR-LDA-KVEV 905

  Fly   750 FNPTSGDPFDMVSLFMMQLAVIMLAKWKHLRVRIFLCEANDERTVGTFDTQTPQMEIFSKMKLEQ 814
            ....:||    :|.|..:..::|..:.:.|: ::.|.:...||.:.:...:: ::.|..|...|:
Zfish   906 VEMNAGD----ISAFTYEKTLVMEQRSQMLK-QMQLSKTEREREIQSISDES-RISIRRKPCGEK 964

  Fly   815 SLKELRITADIVEIQEWSR---DTDFSRHARTLKQFTAQADNVVLEDDDE--VGE---------- 864
            .....::....|.:.|.::   |.:...||..:::.|..:|.|.:....|  :||          
Zfish   965 QTHNSKLKVATVNLDEEAQLIHDKNTKSHATLVEKATPTSDRVHMTWTKEKLIGERNRLRDASMH 1029

  Fly   865 ---------------ETLNRSLLYMQRANQIIRERSDQTALSFIYLAAPPKLSAPDFAQRSASYM 914
                           :|..|.:....:.|:::.::|....|..:.:..|||....|     .:||
Zfish  1030 VRDIFNMKPEWENLDQTNVRRMHTAVKLNEVVVKKSKGAQLVLLNMPGPPKNKGGD-----ENYM 1089

  Fly   915 ELLTELTADLPPTILVHG----VSTVTS 938
            |.|..||..|...:||.|    |.|:.|
Zfish  1090 EFLEVLTEGLDHVLLVRGGGREVITIYS 1117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10413NP_001286048.1 2a30 22..932 CDD:273347 272/1056 (26%)
SLC12 577..932 CDD:281515 92/427 (22%)
slc12a7aXP_005171306.1 2a30 62..1117 CDD:273347 275/1066 (26%)
SLC12 704..1117 CDD:281515 97/442 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594144
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.