DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10413 and Slc12a1

DIOPT Version :9

Sequence 1:NP_001286048.1 Gene:CG10413 / 35111 FlyBaseID:FBgn0032689 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_001257546.1 Gene:Slc12a1 / 25065 RGDID:3685 Length:1095 Species:Rattus norvegicus


Alignment Length:1048 Identity:263/1048 - (25%)
Similarity:445/1048 - (42%) Gaps:212/1048 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FRSFGSLFGGSQN--------------------SGDR-------------PHTPQDGDGYVEFGM 55
            :|:.||:.|...|                    |.||             .:..:|..|.|:||.
  Rat   111 YRNTGSVSGPKVNRPSLQEIHEQLAKNVAVAPGSADRVANGDGMPGDEQAENKEEDVTGVVKFGW 175

  Fly    56 QDPDRSGRTLGTFAGVFSPVALSMFSALVFIRVGYIVGNAGLYVTLLQFLIAYGILLFTVASVCA 120
                        ..||.....|:::..::|||:.:|||.||:.:.:|..|::..:...|..|..|
  Rat   176 ------------VKGVLVRCMLNIWGVMLFIRLSWIVGEAGIGLGVLIILLSTMVTSITGLSTSA 228

  Fly   121 ISTNGAIEGGGVYFMISRTLGLEFGGSIGTLFFFANVVGSAMAISGCTEGIMDNFGPRGHFVSGD 185
            |:|||.:.|||.|::|||:||.|||||||.:|.|||.|..||.:.|..|.::|      .....|
  Rat   229 IATNGFVRGGGAYYLISRSLGPEFGGSIGLIFAFANAVAVAMYVVGFAETVVD------LLKESD 287

  Fly   186 SHLPDGDWWRFLTSSMINTLQLLVCLVGAALFAKTSVIILATVTVCLFATYFSFLFVGATNNTIP 250
            |.:.|......:..|:...:.|.:.:.|....||..||:|..:.:.:     :..|:|..     
  Rat   288 SMMVDPTNDIRIIGSITVVILLGISVAGMEWEAKAQVILLVILLIAI-----ANFFIGTV----- 342

  Fly   251 VPGDNILSNTTTFLDYTGLNATTLRDNLGSHYGRDYTSNGKQVDFSTTFGVLFSGVTGIMAGANM 315
            :|.:| ...:..|.:|   .|:...:|.|..:     :.|:  .|.:.|.:.|...|||:||||:
  Rat   343 IPSNN-EKKSRGFFNY---QASIFAENFGPSF-----TEGE--GFFSVFAIFFPAATGILAGANI 396

  Fly   316 SGELKNPSKSIPYGTLSAVAFTFVSYIILSFLM--------------------------SCTTPY 354
            ||:|::|..:||.||:.|:..|.|:||.::..:                          :|...|
  Rat   397 SGDLEDPQDAIPRGTMLAIFITTVAYIGVAICVAACVVRDATGSMNDTVVSGMNCNGSAACGLGY 461

  Fly   355 -----------FTMQNNYLFLMPVNLWPPFTAIGILTATFSTSLSNLIGSSRILEALSKDQVFGS 408
                       :.:.||:..:..|:.:.|....||.:||.|::|::|:.:.::.:||.||.:|..
  Rat   462 DFSRCQHEPCQYGLMNNFQVMSMVSGFGPLITAGIFSATLSSALASLVSAPKVFQALCKDNIFKG 526

  Fly   409 LLNFVIHGTWKGN-PIAAVAVSWCLVECILLIGSFNIIAQINSVLFMLSYLATNLACLGIELTGA 472
             |.|...|..|.| |:....:::.:....:||...|:||.|.|..|:.||...|.:|.......:
  Rat   527 -LQFFAKGYGKNNEPLRGYFLTFVIAMAFILIAELNVIAPIISNFFLASYALINFSCFHASYAKS 590

  Fly   473 PNFRPLFKFFTWHTCLVGLLGTLIMMFVINFIYASSCIILCLILVIALHLFSPATQAAQWGSISQ 537
            |.:||.:..:.....|.|.:....:|||||:..|....::.|.|.|.:....|   ...|||.:|
  Rat   591 PGWRPAYGIYNMWVSLFGAILCCAVMFVINWWAAVITYVIELFLYIYVTYKKP---DVNWGSSTQ 652

  Fly   538 ALMFHQVRKYLLMLDPRKDHVKFWRPQILLLVSSPRSCCPLVDFVNDL-KKSGLYIIGHVKLGD- 600
            ||.:.......|.|...:||||.:|||.::|...|.:...|:|..:.. |.|||.|...|.:|. 
  Rat   653 ALSYVSALDNALELTTVEDHVKNFRPQCIVLTGGPMTRPALLDITHAFTKNSGLCICCEVFVGPR 717

  Fly   601 ---FKGIEDAEDNQQWWSFLDHMRVKAFTEVTLSRSIREGVQHLIRLSGIGAMKPNTIILGFYDS 662
               .|.:......:|.|  |...::|||.....:...|:||:.|::.||:|.|||||:::|:..:
  Rat   718 KLCVKEMNSGMAKKQAW--LMKNKIKAFYAAVAADCFRDGVRSLLQASGLGRMKPNTLVIGYKKN 780

  Fly   663 --EAPRDFFQN-GSSPYKTDDFNNGEI-----QNF---PIRRDGDPKQFQIQEYVQILCDTLRMK 716
              :||....:| ....:...||..|.:     |.|   |:.:..|..:...||.:.:   ...:|
  Rat   781 WRKAPLSELENYVGIIHDAFDFEIGVVIVRISQGFDISPVLQVQDELEKLEQERLAL---EAAIK 842

  Fly   717 KNLC------------------LCRNFQRLDKNFISM-SKHV--------------------KYI 742
            .|.|                  :.:...:.|.|..:: |.||                    ..|
  Rat   843 DNDCEEGKGGIRGLFKKAGKLNITKPAPKKDSNISTIQSMHVGEFNQKLVEASAQFKKKQGKGTI 907

  Fly   743 DVWPINIFNPTSGDPFDMVSLFMMQLAVIML-AKWKHLRVRIF----LCEANDER-----TVGTF 797
            |||.:          ||...|.::...::.| .|||..::||:    :....:|:     .:..|
  Rat   908 DVWWL----------FDDGGLTLLIPYILTLRKKWKDCKLRIYVGGKINRIEEEKISMASLLSKF 962

  Fly   798 DTQTPQMEIFSKMKLEQSLKELRITADIVE---IQEWSRDTDFSRHARTLKQFTAQADNVVLEDD 859
            ..:...:.|...:.::.:.:..::..:::|   :.|..:|      ..|.::...::...:.:.:
  Rat   963 RIKFADIHIIGDINIKPNKESWKVFEEMIEPYRLHESHKD------LTTAEKLKRESPWKITDAE 1021

  Fly   860 DEVGEETLNRSLLYMQRANQIIRERSDQTALSFIYLAAPPKLSAPDFAQRSASYMELLTELTADL 924
            .|..:|...|.:    |.|::::|.|....|..:.|....|.|..|..     ||..|..||.:|
  Rat  1022 LEAVKEKSYRQV----RLNELLQEHSRAANLIVLSLPVARKGSISDLL-----YMAWLEILTKNL 1077

  Fly   925 PPTILVHG 932
            ||.:||.|
  Rat  1078 PPVLLVRG 1085

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10413NP_001286048.1 2a30 22..932 CDD:273347 262/1046 (25%)
SLC12 577..932 CDD:281515 91/422 (22%)
Slc12a1NP_001257546.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..45
AA_permease_N 86..152 CDD:285588 8/40 (20%)
2a30 100..1095 CDD:273347 263/1048 (25%)
SLC12 690..1095 CDD:281515 92/426 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352223
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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