DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10413 and Slc12a4

DIOPT Version :10

Sequence 1:NP_609887.1 Gene:CG10413 / 35111 FlyBaseID:FBgn0032689 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_001240733.1 Gene:Slc12a4 / 20498 MGIID:1309465 Length:1087 Species:Mus musculus


Alignment Length:1118 Identity:295/1118 - (26%)
Similarity:452/1118 - (40%) Gaps:289/1118 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EQETAPIANSRSGRTGSVFRSFGSLFGGSQNSGDRPHTPQDGDGYVEFGMQDPDRSGRTLGTFAG 70
            |.:..|..:|..|:    ..|:.:|..|::...:    .:.|:|......:.|     ::||..|
Mouse    74 ELDIRPKVSSLLGK----LVSYTNLTQGAKEHEE----AESGEGGRRRAAKAP-----SMGTLMG 125

  Fly    71 VFSPVALSMFSALVFIRVGYIVGNAGLYVTLLQFLIAYGILLFTVASVCAISTNGAIEGGGVYFM 135
            |:.|...::|..::|:|:.::||.||:...||..||.....|.|..|:.||:|||.:..||.|||
Mouse   126 VYLPCLQNIFGVILFLRLTWMVGTAGVLQALLIVLICCCCTLLTAISMSAIATNGVVPAGGSYFM 190

  Fly   136 ISRTLGLEFGGSIGTLFFFANVVGSAMAISGCTEGIMDNFG-PRGHFVSGDSHLPDGDWWRFLTS 199
            |||:||.||||::|..|:......:||.|.|..|.::.... |...|....:|        .::|
Mouse   191 ISRSLGPEFGGAVGLCFYLGTTFAAAMYILGAIEILLTYIAPPAAIFYPSGTH--------DMSS 247

  Fly   200 SMIN----------TLQLLVCLVGAALFAKTSVIILATVTVCLFATY------------FSFLFV 242
            :.:|          ||..||..||.....|.:.:.||.|.:.:.:.|            |....:
Mouse   248 ATLNNMRVYGTIFLTLMTLVVFVGVKYVNKFASLFLACVIISILSIYAGGIKSIFDPPVFPVCML 312

  Fly   243 GATNNTI----------PVPGDN--------------------------ILSNTTTFLDYTGLNA 271
            |  |.|:          .|..||                          :|:|.|......|..|
Mouse   313 G--NRTLSRDQFDICAKTVVVDNETVATRLWTFFCHSPNLTADSCDPYFLLNNVTEIPGIPGAAA 375

  Fly   272 TTLRDNLGSHY---GRDYTSNG---------KQ-------VDFSTTF----GVLFSGVTGIMAGA 313
            ..|::||.|.|   |.....:|         |:       .|.:|:|    |:.|..|||||||:
Mouse   376 GVLQENLWSAYLEKGEVVEKHGLPSTDTLGLKESLSLYVVADIATSFTVLVGIFFPSVTGIMAGS 440

  Fly   314 NMSGELKNPSKSIPYGTLSAVAFTFVSYIILSFLMSCTTPYFTMQNNYLFLMPVNL------WP- 371
            |.||:|::..||||.||:.|:..|.:.|.....|.........:::.|...:..||      || 
Mouse   441 NRSGDLRDAQKSIPVGTILAIVTTSLVYFSSVILFGACIEGVVLRDKYGDGVSRNLVVGTLAWPS 505

  Fly   372 PFT-AIGILTATFSTSLSNLIGSSRILEALSKD------QVFGSLLNFVIHGTWKGNPIAAVAVS 429
            |:. .:|...:|....|.:|.|:.|:|:|::||      :|||       ||...|.|..|:.::
Mouse   506 PWVIVVGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFG-------HGKANGEPTWALLLT 563

  Fly   430 WCLVECILLIGSFNIIAQINSVLFMLSYLATNLACLGIELTGAPNFRPLFKFFTWHTCLVGLLGT 494
            ..:.|..:||.|.:::|.|.|:.|::.||..||||....|...||:||.||::.|....:|:...
Mouse   564 ALIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWTLSFLGMSLC 628

  Fly   495 LIMMFVINFIYASSCIILCLILVIALHLFSPATQAAQWGSISQALMFHQVRKYLLMLDPRKDHVK 559
            |.:|||.::.||   ::..||..:............:||...:.|.....|..||.|:....|.|
Mouse   629 LALMFVSSWYYA---LVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTK 690

  Fly   560 FWRPQILLL--------VSSPRSCCPLVDFVNDLKK-SGLYIIGHVKLGDF-KGIEDAEDNQQW- 613
            .||||:|:|        |..||    |:.|.:.||. .||.|:|.|..|.| :...:|:..:|. 
Mouse   691 NWRPQLLVLLKLDEDLHVKYPR----LLTFASQLKAGKGLTIVGSVIQGSFLESYGEAQAAEQTI 751

  Fly   614 WSFLDHMRVKAFTEVTLSRSIREGVQHLIRLSGIGAMKPNTIILGFYDSEAPRDFFQNGSSPYKT 678
            .:.:|..:||.|.:|.::..:|||:.|||:..|:|.|:.|:::||:               ||..
Mouse   752 KNMMDIEKVKGFCQVVVASKVREGLAHLIQSCGLGGMRHNSVVLGW---------------PYGW 801

  Fly   679 DDFNNGEIQNFPIRRDGDPKQFQIQEYVQILCDTLRMKKNLCLCRNFQRL----DKNF-ISMSKH 738
                         |:..||:.:      :...||:|       |.....|    .||. ...|.|
Mouse   802 -------------RQSEDPRAW------KTFIDTVR-------CTTAAHLALLVPKNIAFYPSNH 840

  Fly   739 VKY----IDVWPINIFNPTSGDPFDMVSLFMMQLAVIMLAKWKHLRVRIFLCEANDERTVGTFDT 799
            .:|    ||||.|    ...|....::...:.|..|     ||..|:|||        ||...|.
Mouse   841 ERYLDGHIDVWWI----VHDGGMLMLLPFLLRQHKV-----WKKCRMRIF--------TVAQMDD 888

  Fly   800 QTPQMEIFSKMKLEQSLKELRITADIVEIQEWSRD--------------------------TDFS 838
            .:.||    |..|...|..||:.|::..::..:.|                          |:..
Mouse   889 NSIQM----KKDLAIFLYHLRLEAEVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLTKTERD 949

  Fly   839 RHARTLK--------------------------QFTAQADNVVLEDDDEVGEETLNRSLLYMQ-- 875
            |.|:.:|                          |.|...|..:.|..|........|.|::::  
Mouse   950 REAQLVKDRHSALRLESLYSDEEEESVAGADKIQMTWTRDKYMAEPWDPSHAPDNFRELVHIKPD 1014

  Fly   876 -----------RANQIIRERSDQTALSFIYLAAPPKLSAPDFAQRSASYMELLTELTADLPPTIL 929
                       :.|::|..||....|..:.:..|||.|..|     .:|||.|..||..|...:|
Mouse  1015 QSNVRRMHTAVKLNEVIVTRSHDARLVLLNMPGPPKNSEGD-----ENYMEFLEVLTEGLERVLL 1074

  Fly   930 VHG----VSTVTS 938
            |.|    |.|:.|
Mouse  1075 VRGGGREVITIYS 1087

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10413NP_609887.1 AA_permease_2 22..932 CDD:459263 287/1090 (26%)
Slc12a4NP_001240733.1 2a30 44..1087 CDD:273347 294/1116 (26%)
Scissor helix. /evidence=ECO:0000250|UniProtKB:Q9UP95 667..683 4/15 (27%)

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