DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10413 and F10E7.9

DIOPT Version :9

Sequence 1:NP_001286048.1 Gene:CG10413 / 35111 FlyBaseID:FBgn0032689 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_495469.2 Gene:F10E7.9 / 174167 WormBaseID:WBGene00017350 Length:603 Species:Caenorhabditis elegans


Alignment Length:555 Identity:133/555 - (23%)
Similarity:239/555 - (43%) Gaps:115/555 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 GTFAGVFSPVALSMFSALVFIRVGYIVGNAGLYVTLLQFLIAYGILLFTVASVCAISTNGAIEGG 130
            ||:.|||:.|.:::|..:||:|:|:|||.||:..::|...|...:.|.||.|...|.....|:.|
 Worm    48 GTWDGVFATVMVNIFGIIVFLRLGWIVGTAGVANSILLLGICTSLALITVFSAIGIVERCQIKSG 112

  Fly   131 GVYFMISRTLGLEFGGSIGTLFFFANVVGSAMAISGCTEGIMDNFGPRGHFVSGDSHLPDGDWWR 195
            |:||::|..||.:.||:||.::.|...|.:.:...|..|.:       .|....:|.:       
 Worm   113 GIYFLVSHVLGHQIGGAIGIIYAFGQAVATGLVAVGFGESV-------AHLFESESKI------- 163

  Fly   196 FLTSSMINTLQLLVCL--VGAALFAKTSVIILATVTVCLFATYFSFLFVGATNNTIPVPGDNILS 258
            .:....|.||.:|..:  .|.....:..:::|  :|:.|..|.|.|   ||..::.|..|     
 Worm   164 MIKGIAILTLMVLTAVNTAGVTWVVRLQIVLL--LTIALAVTDFIF---GALFSSEPESG----- 218

  Fly   259 NTTTFLDYTGLNATTLRDNLGSHY---GRDYTSNGKQV---DFSTTFGVLFSGVTGIMAGANMSG 317
                   ....::..:|.|..|||   ........:|:   .|.|.|||.|:...|::||.||||
 Worm   219 -------VFRFSSERIRVNADSHYEAVNCSIIGIPRQIPEQSFFTVFGVFFANFLGVLAGVNMSG 276

  Fly   318 ELKNPSKSIPYGTLSAVAFT----FVSYIILSFLMSCTTPYFTMQNNYLFLM-------PVNLWP 371
            :||:|.||||.|.||||..:    |:..:||..:           .:.:||:       .|.|..
 Worm   277 DLKDPHKSIPLGELSAVGVSSTICFIFIMILGGV-----------GDRMFLLCDVMISEKVALTG 330

  Fly   372 PFTAIGILTATFSTSLSNLIGSSRILEALSKDQVFGSLLNFVIHGTW-KGNPIAAVAVSWCLVEC 435
            ....:|:...:.|:::.:|:|:.|:|:.::::.:. ..||.:..|.. ..||:.|..:...:...
 Worm   331 IVFLVGLYVCSLSSTVGSLLGTPRVLQGIAEEGII-PCLNVLARGVGPNDNPVLAGYLLMGVASL 394

  Fly   436 ILLIGSFNIIAQINSVLFMLSYLATNLACLGIELT-----------------GAPN-FRPLFKFF 482
            .:|:|..|.:|.::::.|:::|...|.:.:.:.::                 |:.| ...|.:.|
 Worm   395 FVLLGDLNQLAILSTMPFLITYAYVNYSYVSLAMSYDLATVQHADEVETVGYGSTNKMNDLNELF 459

  Fly   483 -----------------------TWHT-------CLVGLLGTLIMMFVINFIYASSCIILCLILV 517
                                   ||::       ..:|.|..|.::.:|:|.:|    :...:.:
 Worm   460 PERRDVNITSTEETETGIISQEATWYSMFSNRYVSFLGFLVNLAILLLIHFWFA----VAHFVAL 520

  Fly   518 IALHLFSPATQAAQWGSISQALMFHQVRKYLLMLD 552
            |||:.:...........||...:.|..:.....||
 Worm   521 IALYWYIGRVCPTCGPGISTFSLCHMFKTVFSSLD 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10413NP_001286048.1 2a30 22..932 CDD:273347 133/555 (24%)
SLC12 577..932 CDD:281515
F10E7.9NP_495469.2 2a30 47..>557 CDD:273347 133/555 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.