DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10413 and Slc12a6

DIOPT Version :9

Sequence 1:NP_001286048.1 Gene:CG10413 / 35111 FlyBaseID:FBgn0032689 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_598410.2 Gene:Slc12a6 / 107723 MGIID:2135960 Length:1150 Species:Mus musculus


Alignment Length:1100 Identity:284/1100 - (25%)
Similarity:458/1100 - (41%) Gaps:255/1100 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EQETAPIANSRSGRTGSVFRSFGSLFGGSQNSGDRPHTPQDGDGYVEFGMQDPDRSGRTLGTFAG 70
            |.:|.|..:|...|    ..::.:|     ..|.:.|  ::.:...| |.:.|.:|.: :|||.|
Mouse   139 EMDTRPKVSSLLNR----MANYTNL-----TQGAKEH--EEAENITE-GKKKPTKSPQ-MGTFMG 190

  Fly    71 VFSPVALSMFSALVFIRVGYIVGNAGLYVTLLQFLIAYGILLFTVASVCAISTNGAIEGGGVYFM 135
            |:.|...::|..::|:|:.::||.||:.......||.....:.|..|:.||:|||.:..||.|||
Mouse   191 VYLPCLQNIFGVILFLRLTWVVGTAGILQAFAIVLICCCCTMLTAISMSAIATNGVVPAGGSYFM 255

  Fly   136 ISRTLGLEFGGSIGTLFFFANVVGSAMAISGCTEGIMDNFGPRGHFVSGDSHLPDGDWWRFLTSS 200
            |||.||.||||::|..|:......:||.|.|..|..:....||......|..|.:       :::
Mouse   256 ISRALGPEFGGAVGLCFYLGTTFAAAMYILGAIEIFLVYIVPRAAIFRSDDALKE-------SAA 313

  Fly   201 MIN----------TLQLLVCLVGAALFAKTSVIILATVTVCLFATY------------FSFLFVG 243
            |:|          .|.:||..:|.....|.:.:.||.|.|.:.|.|            |....:|
Mouse   314 MLNNMRVYGTAFLVLMVLVVFIGVRYVNKFASLFLACVIVSILAIYAGAIKSSFAPPHFPVCMLG 378

  Fly   244 -----------------ATNNTIPVPGDNILSNTTTFLDYT-----------------GLNATTL 274
                             ..|.|:|........|::.|.:.|                 ||.:..:
Mouse   379 NRTLSSRHLDICSKTKEVDNMTVPSKLWGFFCNSSQFFNATCDEYFVHNNVISIQGIPGLASGII 443

  Fly   275 RDNLGSHY-------------GRDYTSNGKQ----VDFSTTF----GVLFSGVTGIMAGANMSGE 318
            .:||.|:|             ..|...|...    .|.:|:|    |:.|..|||||||:|.||:
Mouse   444 TENLWSNYLPKGEIIEKPSAKSSDVLGNLNHEYVLADITTSFTLLVGIFFPSVTGIMAGSNRSGD 508

  Fly   319 LKNPSKSIPYGTLSAVAFTFVSYIILSFLMSCTTPYFTMQNNYLFLMPVNL------WP-PFT-A 375
            ||:..||||.||:.|:..|...|:....|.........:::.:...:..||      || |:. .
Mouse   509 LKDAQKSIPIGTILAILTTSFVYLSNVVLFGACIEGVVLRDKFGDAVKGNLVVGTLSWPSPWVIV 573

  Fly   376 IGILTATFSTSLSNLIGSSRILEALSKD------QVFGSLLNFVIHGTWKGNPIAAVAVSWCLVE 434
            ||...:|....|.:|.|:.|:|:|::||      :|||       |....|.|..|:.::..:.|
Mouse   574 IGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFG-------HSKANGEPTWALLLTAAIAE 631

  Fly   435 CILLIGSFNIIAQINSVLFMLSYLATNLACLGIELTGAPNFRPLFKFFTWHTCLVGLLGTLIMMF 499
            ..:||.|.:::|.|.|:.|::.||..||||....|...||:||.|:::.|....:|:...|.:||
Mouse   632 LGILIASLDLVAPILSMFFLMCYLFVNLACALQTLLRTPNWRPRFRYYHWALSFMGMSICLALMF 696

  Fly   500 VINFIYASSCIILCLILVIALHLFSPATQA-AQWGSISQALMFHQVRKYLLMLDPRKDHVKFWRP 563
            :.::.||    |:.:::...::.:.....| .:||...:.|.....|..||.|:....|.|.|||
Mouse   697 ISSWYYA----IVAMVIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARFALLRLEEGPPHTKNWRP 757

  Fly   564 QILLL--------VSSPRSCCPLVDFVNDLKK-SGLYIIGHVKLGDFKGIEDAEDNQQWWSFLDH 619
            |:|:|        |..||    |:.|.:.||. .||.|:|.|.:|:|  :|:..|.......:.|
Mouse   758 QLLVLLKLDEDLHVKHPR----LLTFASQLKAGKGLTIVGSVIVGNF--LENYGDALAAEQTIKH 816

  Fly   620 M----RVKAFTEVTLSRSIREGVQHLIRLSGIGAMKPNTIILGF-------YDSEAPRDFF---- 669
            :    :||.|.::.::..::||:.|||:..|:|.||.||:::|:       .|:.|.:.|.    
Mouse   817 LMEAEKVKGFCQLVVAAKLKEGISHLIQSCGLGGMKHNTVVMGWPNGWRQSEDARAWKTFIGTVR 881

  Fly   670 ------------QNGS-SPYKTDDFNNGEIQNFPIRRDGDPKQFQIQEYVQILCDTLRMKK--NL 719
                        :|.| .|...:.|:.|.|..:.|..||.        .:.:|...|:..|  ..
Mouse   882 VTTAAHLALLVAKNVSFFPSNVEQFSEGNIDVWWIVHDGG--------MLMLLPFLLKQHKVWRK 938

  Fly   720 CLCRNF--QRLDKNFISMSKHVKYIDVWPINIFNPTSGDPFDMVSLFMMQLAVIMLAKWKHLRV- 781
            |..|.|  .:|:.|.|.|.|                             .||..:.    |||: 
Mouse   939 CSIRIFTVAQLEDNSIQMKK-----------------------------DLATFLY----HLRIE 970

  Fly   782 -RIFLCEANDERTVGTFDTQTPQMEIFSKM-------KLE-----QSLKE----LRITA------ 823
             .:.:.|.:|.........:|..||..|:|       |.|     |.:|:    ||:|:      
Mouse   971 AEVEVVEMHDSDISAYTYERTLMMEQRSQMLRHMRLSKTERDREAQLVKDRNSMLRLTSIGSDED 1035

  Fly   824 -DIVEIQE-----WSRDTDFSRHARTLKQFTAQADNVVLEDDDEVGEETLNRSLLYMQRANQIIR 882
             :....||     |::|...:...:.:|......|.:.:..|     ::..|.:....:.|::|.
Mouse  1036 EETETYQEKVHMTWTKDKYMASRGQKVKSMEGFQDLLNMRPD-----QSNVRRMHTAVKLNEVIV 1095

  Fly   883 ERSDQTALSFIYLAAPPKLSAPDFAQRSASYMELLTELTADLPPTILVHG----VSTVTS 938
            .:|.:..|..:.:..||:....|     .:|||.|..||..|...:||.|    |.|:.|
Mouse  1096 NKSHEAKLVLLNMPGPPRNPEGD-----ENYMEFLEVLTEGLERVLLVRGGGSEVITIYS 1150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10413NP_001286048.1 2a30 22..932 CDD:273347 275/1072 (26%)
SLC12 577..932 CDD:281515 95/417 (23%)
Slc12a6NP_598410.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..108
2a30 109..1150 CDD:273347 283/1098 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..181 5/22 (23%)
SLC5-6-like_sbd 209..>360 CDD:294310 50/157 (32%)
SLC12 774..1150 CDD:281515 100/432 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848606
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.