DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10413 and slc12a1

DIOPT Version :9

Sequence 1:NP_001286048.1 Gene:CG10413 / 35111 FlyBaseID:FBgn0032689 Length:941 Species:Drosophila melanogaster
Sequence 2:XP_021323409.1 Gene:slc12a1 / 100329975 ZFINID:ZDB-GENE-080130-3 Length:1037 Species:Danio rerio


Alignment Length:1073 Identity:271/1073 - (25%)
Similarity:459/1073 - (42%) Gaps:233/1073 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QETAPIANSRSGRTG-----SVFRSFGSLFGGSQNSGDRPHTPQDGDGY-------VE--FGMQD 57
            :..|.|:..|:.|..     .||:..|.|        :.|...:|.:|.       ||  ..:::
Zfish    57 RNAASISGHRAVRPSLHELHDVFQKNGGL--------NLPSPVEDSEGVDSSTLGDVESVTPLEE 113

  Fly    58 PDRSGRT-LGTFAGVFSPVALSMFSALVFIRVGYIVGNAGLYVTLLQFLIAYGILLFTVASVCAI 121
            .|..|.. .|...||.....|:::..::|||:.::.|.||:.:.::..|::..:...|..|:.||
Zfish   114 KDTGGVVKFGWIKGVLVRCMLNIWGVMLFIRLSWVFGQAGIGLGIVVVLLSMVVTSVTCLSMSAI 178

  Fly   122 STNGAIEGGGVYFMISRTLGLEFGGSIGTLFFFANVVGSAMAISGCTEGIMDNFGPRGHFVSGDS 186
            .|||.:.|||.|::|||:||.|||||||.:|.|||.|..||.:.|..|.:::        :..||
Zfish   179 CTNGVVRGGGAYYLISRSLGPEFGGSIGLIFAFANAVAVAMYVVGFAETVVE--------LLKDS 235

  Fly   187 HLPDGDWWRFLTSSMINTLQLLVCLVGAALF----------AKTSVIILATVTVCLFATYFSFLF 241
            :.        |.....|.::::.|:....|.          ||..|.:|..:.|.:     :.:|
Zfish   236 NA--------LIVDPTNDIRIIGCITVVLLMGITVAGMEWEAKAQVALLVILLVAI-----ANVF 287

  Fly   242 VGATNNTIPVPGDNILSNTTTFLDYTGLNATTLRDNLGSHYGRDYTSNGKQVDFSTTFGVLFSGV 306
            ||   ..||...|   ..:..|.:|   :.:..::|....: ||..:      |.:.|.:.|...
Zfish   288 VG---TVIPSTQD---KRSKGFFNY---HESIAKENFIPDF-RDGET------FFSVFAIFFPAA 336

  Fly   307 TGIMAGANMSGELKNPSKSIPYGTLSAVAFTFVSYIILSFLMS---------------------- 349
            |||:||||:||:|::|..::|.|||.|:..|.|:|:.::.::|                      
Zfish   337 TGILAGANISGDLRDPQGALPKGTLLAIFITGVTYLGIALVVSVTVVRDATGNRNDTIQAGASCN 401

  Fly   350 ----CTTPY-----------FTMQNNYLFLMPVNLWPPFTAIGILTATFSTSLSNLIGSSRILEA 399
                |...|           :.:.||:..:..|:.:.|....|..:||.|::|::|:.:.::.:|
Zfish   402 FSSACDFGYDFSICQTTKCNYGLMNNFQVMTLVSGFGPLITAGTFSATLSSALASLVSAPKVFQA 466

  Fly   400 LSKDQVFGSLLNFVIHGTWKGN-PIAAVAVSWCLVECILLIGSFNIIAQINSVLFMLSYLATNLA 463
            |.||.:: ..|.|...|..|.| ||....:::.:....:||...|.||.|.|..|:.||...|.:
Zfish   467 LCKDNIY-KALKFFAKGHGKNNEPIRGYVLTFIIAVAFILIAQLNTIAPIISNFFLASYALINYS 530

  Fly   464 CLGIELTGAPNFRPLFKFFTWHTCLVGLLGTLIMMFVINFIYASSCIILCLILVIALHLFSPATQ 528
            |.......:|.:||.:|::.....|.|.:....:|||||:..|.....:...|.|.:.:..|   
Zfish   531 CFHASYAKSPGWRPAYKYYNMWLSLFGAVLCCAVMFVINWWAALLTYGIEFFLYIYVTVKKP--- 592

  Fly   529 AAQWGSISQALMFHQVRKYLLMLDPRKDHVKFWRPQILLLVSSPRSCCPLVDFVNDLKKS-GLYI 592
            ...|||.:||:.|.......|:|....||:|.:||:.|:|..||||...|:|..:...|: ||.:
Zfish   593 DVNWGSSTQAVTFINAVNNALILSGVDDHIKNFRPKCLVLTGSPRSRPALLDLSHSFTKNYGLCL 657

  Fly   593 IGHVKLGD-FKGIEDAED----NQQWWSFLDHMRVKAFTEVTLSRSIREGVQHLIRLSGIGAMKP 652
            ...|.:|. .|.::|..:    ||.|   |:..:.|||.....|.::|:|.|.|::.||:|.|||
Zfish   658 TCEVFVGSRDKNLQDMIEGDVQNQLW---LNKQKHKAFYTPIASDTLRDGAQALMQASGLGRMKP 719

  Fly   653 NTIILGF---YDSEAPRDFFQNGSSPYKTDDFNNGEI-----QNFPI----RRDGDPKQFQIQEY 705
            ||::|||   :.:..|:|........:.|.||..|.:     |...|    :.:.:.::..::: 
Zfish   720 NTVMLGFKRDWRTSKPQDVQNYVGILHDTFDFELGTVIMRVSQGMDISHILKAEEEMERMILEQ- 783

  Fly   706 VQILCDTLRMKKNLCLCRNFQ---------------------------------RLDKNFISMSK 737
                 ..|.|::|     :||                                 :|::..:..|.
Zfish   784 -----QALEMEEN-----DFQPGPRGFFNRAKKTPKKEPTSKVSLGVPQASDLAKLNQRLVEASG 838

  Fly   738 HVKY------IDVWPINIFNPTSGDPFDMVSLFMMQLAVIML-AKWKHLRVRIFLCEANDER--- 792
            ..|.      ||||.:          ||...|.::...::.. .||:..|:|||:. ...||   
Zfish   839 QFKQQQGKGNIDVWWL----------FDDGGLTLLLPHILTTRKKWRECRLRIFIA-GQPERIQQ 892

  Fly   793 -------TVGTFDTQTPQMEIFSKMKLEQSLKELRITADIVE---IQEWSRD---TDFSRHARTL 844
                   .:..|..:...:::.|.:.:..|.:..::..|::|   :.|.|:|   |:..|..:..
Zfish   893 DKEEMQLLLKKFRIKCEDIKVISDLNIRPSAENWKLFEDMIEPFRLHEGSKDSSQTEALRKEQPW 957

  Fly   845 KQFTAQADNVVLEDDDEVGEETLNRSLLYMQRANQIIRERSDQTALSFIYLAAPPKLSAPDFAQR 909
            |...|:.|             ...:..:...|.|::::|.|....|..:.|....|.|..|..  
Zfish   958 KITDAELD-------------AFEQKTMLQVRLNELLQESSRAAKLIVVSLPIARKGSVSDHL-- 1007

  Fly   910 SASYMELLTELTADLPPTILVHG----VSTVTS 938
               ||..|..||.:||||:|:.|    |.|:.|
Zfish  1008 ---YMAWLEALTKNLPPTLLIRGNHKSVLTIYS 1037

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10413NP_001286048.1 2a30 22..932 CDD:273347 263/1041 (25%)
SLC12 577..932 CDD:281515 95/428 (22%)
slc12a1XP_021323409.1 2a30 45..1037 CDD:273347 270/1071 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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