DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment amos and Tcf23

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:XP_006504158.1 Gene:Tcf23 / 69852 MGIID:1934960 Length:216 Species:Mus musculus


Alignment Length:115 Identity:31/115 - (26%)
Similarity:53/115 - (46%) Gaps:11/115 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 LGKNQGRSPRYWNKQQRSKPYDKLSTSMSSSTSSASSSSSSSAGFGGEVLKKRRLAAN----ARE 147
            ||.::.||.....:|...:.....:..:|.:||:...:.:.....|       |..|:    |||
Mouse    27 LGTDRKRSRINRTRQDLWEDTSWSNHRLSRATSAPRGTRARGTAHG-------RSEASPENAARE 84

  Fly   148 RRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLLSRD 197
            |.|:.:|..||..|:..:|::..|.:|||.:.|.:|.:||..|...|..:
Mouse    85 RTRVKTLRQAFLALQAALPAVPPDTKLSKLDVLVLATSYIAHLTRTLGHE 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 22/66 (33%)
Tcf23XP_006504158.1 bHLH_TS_TCF23_OUT 77..132 CDD:381552 19/54 (35%)

Return to query results.
Submit another query.