DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and Olig1

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_068538.2 Gene:Olig1 / 60394 RGDID:621129 Length:261 Species:Rattus norvegicus


Alignment Length:114 Identity:38/114 - (33%)
Similarity:53/114 - (46%) Gaps:33/114 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 YDKLSTSMSSSTSSASSSS---------------------SSSAGFGGEVLKKR-----RLAANA 145
            |.:...|.||||||:|::|                     ..|.|...:..:::     |...|:
  Rat    38 YRQPPISSSSSTSSSSTASLLPKPAREKPEAPLAEPRGPAPESGGARADAKEEQQQQQLRRKINS 102

  Fly   146 RERRRMNSLNDAFDKLRDVV-P-SLGH-----DRRLSKYETLQMAQAYI 187
            |||:||..||.|.|.||:|: | |..|     .|:|||..||.:|:.||
  Rat   103 RERKRMQDLNLAMDALREVILPYSAAHCQGAPGRKLSKIATLLLARNYI 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 26/68 (38%)
Olig1NP_068538.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 41..105 14/63 (22%)
bHLH_TS_OLIG1 96..165 CDD:381512 26/56 (46%)

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