DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and NEUROD4

DIOPT Version :9

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_067014.2 Gene:NEUROD4 / 58158 HGNCID:13802 Length:331 Species:Homo sapiens


Alignment Length:137 Identity:44/137 - (32%)
Similarity:63/137 - (45%) Gaps:17/137 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 QEQQQHHLQANPLGKNQGRSPRYWNKQQRSKP--YDKLSTSMSSSTSSASSSSSSSAG----FGG 133
            :.::...|...|...::|...:...|::.|:|  |..||:......|..........|    ..|
Human     7 KSKEMGELVNTPSWMDKGLGSQNEVKEEESRPGTYGMLSSLTEEHDSIEEEEEEEEDGEKPKRRG 71

  Fly   134 EVLKK-----------RRLAANARERRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYI 187
            ...||           ||:.||||||.||:.||||.|.||.|:|.....::|||.|||::|:.||
Human    72 PKKKKMTKARLERFRARRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYI 136

  Fly   188 GDLVTLL 194
            ..|..:|
Human   137 WALSEVL 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 HLH 137..195 CDD:238036 32/69 (46%)
NEUROD4NP_067014.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..80 14/72 (19%)
HLH 88..144 CDD:238036 30/56 (54%)
Neuro_bHLH 146..264 CDD:289310
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..265
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2611
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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