DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and scxb

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:XP_021328670.1 Gene:scxb / 567817 ZFINID:ZDB-GENE-090806-1 Length:200 Species:Danio rerio


Alignment Length:102 Identity:40/102 - (39%)
Similarity:51/102 - (50%) Gaps:24/102 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 STSSASSSSSSSAGFGG---EVLKKR---------------------RLAANARERRRMNSLNDA 157
            |.|...|..:||.|:|.   .|.|||                     |..||||||.|.||:|.|
Zfish    32 SGSEDKSFRTSSHGYGSFKLGVRKKRYSCRPLAIPTELCTPITEVRQRNTANARERERTNSVNTA 96

  Fly   158 FDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLL 194
            |..||.::|:...||:|||.|||::|.:||..|..:|
Zfish    97 FTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVL 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 34/87 (39%)
scxbXP_021328670.1 bHLH_SF 75..142 CDD:469605 29/59 (49%)

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