DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment amos and tcf21

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:XP_073794575.1 Gene:tcf21 / 558148 ZFINID:ZDB-GENE-051113-88 Length:210 Species:Danio rerio


Alignment Length:150 Identity:45/150 - (30%)
Similarity:68/150 - (45%) Gaps:23/150 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 DTPSVLELEHMLNAQEQQQHHLQANPLGKNQGRSPRYWNKQQRSKPYDKLSTSMSSSTSSASSSS 125
            ||.:.:....:.:..|..:..|....|....|:.|...|:          ||..||:...||.|.
Zfish    30 DTRANMSTGSISDVDEFHESELLDGLLKFGSGKDPGTSNE----------STEDSSNCEGASVSE 84

  Fly   126 -------------SSSAGFGGEVLKKRRLAANARERRRMNSLNDAFDKLRDVVPSLGHDRRLSKY 177
                         |:..|...|..:.:|.|||||||.||..|:.||.:|:..:|.:..|.:|||.
Zfish    85 CTGKRRKSANMRRSAPNGVAQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKL 149

  Fly   178 ETLQMAQAYIGDLVTLLSRD 197
            :||::|.:||..|..:|:.|
Zfish   150 DTLRLASSYIAHLRQILAND 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 26/62 (42%)
tcf21XP_073794575.1 None

Return to query results.
Submit another query.