DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and Bhlhe23

DIOPT Version :9

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_001102681.1 Gene:Bhlhe23 / 499952 RGDID:1559760 Length:223 Species:Rattus norvegicus


Alignment Length:110 Identity:39/110 - (35%)
Similarity:52/110 - (47%) Gaps:27/110 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 SKPYDKLSTSMSSSTSSAS-SSSSSSAGFGGEVLKKR----------------------RLAANA 145
            |.|...|..:.:|...:|: .||...:|...|..::|                      ||:.||
  Rat    41 SGPGGDLPAAPASRVPAATVESSGEQSGDEDEAFERRRRRRGPGVAVDARRRPREQRSLRLSINA 105

  Fly   146 RERRRMNSLNDAFDKLRDVVPSLGHD---RRLSKYETLQMAQAYI 187
            ||||||:.||||.|.||.|:| ..|.   |:|||..||.:|:.||
  Rat   106 RERRRMHDLNDALDGLRAVIP-YAHSPSVRKLSKIATLLLAKNYI 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 HLH 137..195 CDD:238036 30/76 (39%)
Bhlhe23NP_001102681.1 bHLH_TS_bHLHe22_bHLHb5 99..168 CDD:381524 29/52 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339115
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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