DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and tap

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_524124.1 Gene:tap / 39935 FlyBaseID:FBgn0015550 Length:398 Species:Drosophila melanogaster


Alignment Length:185 Identity:53/185 - (28%)
Similarity:76/185 - (41%) Gaps:36/185 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PAIPEFLSNDTFQQLEQLMYQQEFSTSDSQSDGANSCSLEMYYDTPSVLELEHMLNAQEQQQHHL 82
            ||||:..|..|:..:            ...|..|....|   .||.|    .|...:......||
  Fly    54 PAIPQPYSGGTWDAV------------PLSSPPAGFVGL---LDTSS----NHSTRSGRTLVEHL 99

  Fly    83 QAN--------PLGKNQGRSPRYWNKQQRSKPYDKLSTSMSSSTSSASSSSSSSAGFGGEVLKKR 139
            .:.        ||.....:||...|   ..:|..|.:...:..|.|.|.:...      ::.:.|
  Fly   100 NSRATNGVFDPPLTSTPVKSPEDPN---APRPKRKYAVGKNRVTRSRSPTQVV------KIKRFR 155

  Fly   140 RLAANARERRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLL 194
            |:.||.|||.||::||||.:|||..:|||..:.:|:|.|.|:.|..||..|..:|
  Fly   156 RMKANDRERNRMHNLNDALEKLRVTLPSLPEETKLTKIEILRFAHNYIFALEQVL 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 28/63 (44%)
tapNP_524124.1 bHLH_TS_NGN 155..211 CDD:381434 28/56 (50%)

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