DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment amos and bhlhe22

DIOPT Version :9

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_957249.2 Gene:bhlhe22 / 393930 ZFINID:ZDB-GENE-040426-1411 Length:261 Species:Danio rerio


Alignment Length:151 Identity:46/151 - (30%)
Similarity:61/151 - (40%) Gaps:46/151 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 EFSTSDSQSDGANSCSLEMYYDTPSVLELEHMLNAQEQQQHHLQANPLGKNQGRSPRYWNKQQRS 104
            ::..|.:::.||.|...|...|..|....|.||....:     ...|..|::|...   ||:|  
Zfish    74 KYGESANRTSGAESSGGEQSPDDDSDERCEMMLMTDGR-----TTVPGAKSEGGKK---NKEQ-- 128

  Fly   105 KPYDKLSTSMSSSTSSASSSSSSSAGFGGEVLKKRRLAANARERRRMNSLNDAFDKLRDVVPSLG 169
                                            |..||..||||||||:.||||.|:||.|:| ..
Zfish   129 --------------------------------KMLRLNINARERRRMHDLNDALDELRAVIP-YA 160

  Fly   170 HD---RRLSKYETLQMAQAYI 187
            |.   |:|||..||.:|:.||
Zfish   161 HSPSVRKLSKIATLLLAKNYI 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 HLH 137..195 CDD:238036 30/54 (56%)
bhlhe22NP_957249.2 HLH 136..190 CDD:197674 27/47 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578672
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.