DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and Ferd3l

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_001102450.1 Gene:Ferd3l / 366598 RGDID:1311812 Length:166 Species:Rattus norvegicus


Alignment Length:68 Identity:32/68 - (47%)
Similarity:45/68 - (66%) Gaps:6/68 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 GEVLKKR------RLAANARERRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLV 191
            |...:||      |.|||.|||:||.:||:|||:||..||:..:::|||:.|||::|..||..:.
  Rat    90 GRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMT 154

  Fly   192 TLL 194
            .||
  Rat   155 ELL 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 32/68 (47%)
Ferd3lNP_001102450.1 bHLH_TS_FERD3L_NATO3 94..157 CDD:381421 29/62 (47%)

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