DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and Ascl5

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_001385517.1 Gene:Ascl5 / 363991 RGDID:1561854 Length:188 Species:Rattus norvegicus


Alignment Length:60 Identity:25/60 - (41%)
Similarity:37/60 - (61%) Gaps:4/60 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 LKKRRLAANARERRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLLS 195
            ::||    |.|||:|:..:|:.:.:||..:|....::||||.|||:.|..||..|..|||
  Rat    82 IQKR----NERERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLS 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 23/58 (40%)
Ascl5NP_001385517.1 bHLH_TS_ASCL5 76..136 CDD:381590 22/57 (39%)

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