DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and Oli

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_523592.1 Gene:Oli / 35066 FlyBaseID:FBgn0032651 Length:232 Species:Drosophila melanogaster


Alignment Length:122 Identity:46/122 - (37%)
Similarity:64/122 - (52%) Gaps:20/122 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 ANPLGKNQGRSPRYWNKQQRSKPYDKLS--------TSMSSSTSSASSSSSSSAGFGGEVLKKR- 139
            |..:|.:| :.|...||...|.|...||        .::|..|::.:.||..::|.|....|:: 
  Fly    60 AQGMGMSQ-QPPTDENKPGPSAPEKPLSPTAAAIAAIAISGGTTTVAVSSGGASGSGSNSGKQKN 123

  Fly   140 ------RLAANARERRRMNSLNDAFDKLRDVVPSLGHD---RRLSKYETLQMAQAYI 187
                  ||..||||||||:.||||.|:||.|:| ..|.   |:|||..||.:|:.||
  Fly   124 RQGKTVRLNINARERRRMHDLNDALDELRSVIP-YAHSPSVRKLSKIATLLLAKNYI 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 31/66 (47%)
OliNP_523592.1 bHLH_TS_bHLHe22_bHLHb5 129..198 CDD:381524 29/52 (56%)

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