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Protein Alignment amos and olig2
DIOPT Version :9
Sequence 1: | NP_477446.1 |
Gene: | amos / 35110 |
FlyBaseID: | FBgn0003270 |
Length: | 198 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_835201.1 |
Gene: | olig2 / 325288 |
ZFINID: | ZDB-GENE-030131-4013 |
Length: | 273 |
Species: | Danio rerio |
Alignment Length: | 134 |
Identity: | 40/134 - (29%) |
Similarity: | 49/134 - (36%) |
Gaps: | 61/134 - (45%) |
- Green bases have known domain annotations that are detailed below.
Fly 114 MSSSTSSASSSSSS-------------SAGFGGEV------------------------------ 135
|.|.||..||..|| |.||.|.|
Zfish 1 MDSDTSRVSSRPSSPEGDDLFLSAVKKSVGFSGAVSSTQSDSPPELRGADMRGISSAEEDSMALK 65
Fly 136 --------------LKKRRLAANARERRRMNSLNDAFDKLRDVVPSLGHD---RRLSKYETLQMA 183
|:..||..|:|||:||:.||.|.|.||:|:| ..|. |:|||..||.:|
Zfish 66 MLSKKDRKLLSENELQSMRLKINSRERKRMHDLNIAMDGLREVMP-YAHGPSVRKLSKIATLLLA 129
Fly 184 QAYI 187
:.||
Zfish 130 RNYI 133
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
amos | NP_477446.1 |
HLH |
137..195 |
CDD:238036 |
26/54 (48%) |
olig2 | NP_835201.1 |
HLH |
88..142 |
CDD:197674 |
24/47 (51%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170578666 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
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