DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment amos and olig4

DIOPT Version :9

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_955808.1 Gene:olig4 / 324857 ZFINID:ZDB-GENE-030131-3580 Length:244 Species:Danio rerio


Alignment Length:114 Identity:38/114 - (33%)
Similarity:52/114 - (45%) Gaps:40/114 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 MSSSTSSASSSSSS-----SAGF--------GGEVLKKR-------------------------R 140
            |.|..||..|.|||     .:||        .||.::::                         |
Zfish     1 MDSDASSTCSRSSSPDLTVDSGFFSNKMFQAYGETVQQKSEKGLQNAGKTRTRADLSKDDLQDLR 65

  Fly   141 LAANARERRRMNSLNDAFDKLRDVVP-SLGHD-RRLSKYETLQMAQAYI 187
            |..|:|||:||:.||.|.|.||:|:| :.|.. |:|||..||.:|:.||
Zfish    66 LKVNSRERKRMHDLNQAMDGLREVMPYAQGPSVRKLSKISTLLLARNYI 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 HLH 137..195 CDD:238036 26/78 (33%)
olig4NP_955808.1 HLH 69..123 CDD:197674 24/46 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578682
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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