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Protein Alignment amos and atoh1a
DIOPT Version :9
| Sequence 1: | NP_477446.1 |
Gene: | amos / 35110 |
FlyBaseID: | FBgn0003270 |
Length: | 198 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_571166.2 |
Gene: | atoh1a / 30303 |
ZFINID: | ZDB-GENE-990415-17 |
Length: | 292 |
Species: | Danio rerio |
| Alignment Length: | 178 |
Identity: | 61/178 - (34%) |
| Similarity: | 81/178 - (45%) |
Gaps: | 48/178 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 58 MYYDTPSVLEL--EHMLNAQEQQQHHLQANPLGKNQGRSPRYW---------------------- 98
|..||..|:|| :|....:.:|..:..| |.......||.|
Zfish 4 MSTDTREVVELDVQHSSLGRGEQSEYPPA--LALMASSDPRAWLAPVQAGTCAAHAEYLLHSPGS 66
Fly 99 ---------NKQQRSKPYDKL--------STSMSSSTSSASSSSSSSAGFGGEVLKKRRLAANAR 146
|.::.||...|: :.........|.||.|::. |.|:||:|||||
Zfish 67 SAEGVSSASNFRKSSKSPVKVRELCRLKGAVGADEGRQRAPSSKSTNV-----VQKQRRMAANAR 126
Fly 147 ERRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLL 194
|||||:.||.|||:||.|:|:..:|::|||||||||||.||..|..||
Zfish 127 ERRRMHGLNHAFDELRSVIPAFDNDKKLSKYETLQMAQIYINALSDLL 174
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| amos | NP_477446.1 |
HLH |
137..195 |
CDD:238036 |
39/58 (67%) |
| atoh1a | NP_571166.2 |
HLH |
117..175 |
CDD:238036 |
39/58 (67%) |
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
1 |
0.930 |
- |
- |
|
C170578686 |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4395 |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
1 |
1.100 |
- |
- |
O |
PTHR19290 |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2611 |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
| ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.870 |
|
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