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Protein Alignment amos and neurod4
DIOPT Version :9
| Sequence 1: | NP_477446.1 |
Gene: | amos / 35110 |
FlyBaseID: | FBgn0003270 |
Length: | 198 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_739568.2 |
Gene: | neurod4 / 266958 |
ZFINID: | ZDB-GENE-030730-1 |
Length: | 348 |
Species: | Danio rerio |
| Alignment Length: | 154 |
Identity: | 45/154 - (29%) |
| Similarity: | 69/154 - (44%) |
Gaps: | 32/154 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 46 SQSDGANSCSL---EMYYDTPSVLEL--EHMLNAQEQQQHHLQANPLGKNQGRSPRYWNKQQRSK 105
|..||..:..: .::......||: |.|...:|:::. ..:|.:..::|: |..
Zfish 27 SSQDGDRTPEIGHYSLHRSNRGPLEIGSEDMDEEEEEEED----EEMGLDGEKAPK------RRG 81
Fly 106 PYDKLSTSMSSSTSSASSSSSSSAGFGGEVLKKRRLAANARERRRMNSLNDAFDKLRDVVPSLGH 170
|..|..|.... |..:.||:.||||||.||:.||||.|.||.|:|....
Zfish 82 PKKKKMTKARQ-----------------ERFRARRIKANARERSRMHGLNDALDNLRRVMPCYSK 129
Fly 171 DRRLSKYETLQMAQAYIGDLVTLL 194
.::|||.|||::|:.||..|..:|
Zfish 130 TQKLSKIETLRLARNYIWALSEVL 153
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| amos | NP_477446.1 |
HLH |
137..195 |
CDD:238036 |
30/58 (52%) |
| neurod4 | NP_739568.2 |
HLH |
98..154 |
CDD:238036 |
30/56 (54%) |
| Neuro_bHLH |
156..272 |
CDD:289310 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
1 |
0.930 |
- |
- |
|
C170578692 |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2611 |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
| ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.870 |
|
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