DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment amos and Twist1

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_035788.1 Gene:Twist1 / 22160 MGIID:98872 Length:206 Species:Mus musculus


Alignment Length:94 Identity:36/94 - (38%)
Similarity:49/94 - (52%) Gaps:17/94 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 SASSSSSSSAGFGG----------------EVLKKRRLAANARERRRMNSLNDAFDKLRDVVPSL 168
            ||.......||.||                |.|:.:|:.||.|||:|..|||:||..||.::|:|
Mouse    78 SAGGGGGGGAGGGGGGGGGSSSGGGSPQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPTL 142

  Fly   169 GHDRRLSKYETLQMAQAYIGDLVTLLSRD 197
            ..| :|||.:||::|..||..|..:|..|
Mouse   143 PSD-KLSKIQTLKLAARYIDFLYQVLQSD 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 30/78 (38%)
Twist1NP_035788.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..109 6/30 (20%)
bHLH_TS_TWIST1 102..178 CDD:381418 30/70 (43%)
Sufficient for transactivation activity 165..195 2/6 (33%)

Return to query results.
Submit another query.