DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and Tcf21

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_035675.1 Gene:Tcf21 / 21412 MGIID:1202715 Length:179 Species:Mus musculus


Alignment Length:159 Identity:41/159 - (25%)
Similarity:65/159 - (40%) Gaps:49/159 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 QEFSTSDSQSDGANSCSLEMYYDTPSVLELEHMLNAQEQQQHHLQANPLGKNQGRSPRYWNKQQR 103
            :||.||:..::..::|.                 |...|:..    ..|||.:            
Mouse    29 KEFGTSNESTEEGSNCE-----------------NGSPQKGR----GGLGKRR------------ 60

  Fly   104 SKPYDKLSTSMSSSTSSASSSSSSSAGFGGEVLKKRRLAANARERRRMNSLNDAFDKLRDVVPSL 168
                            .|.:..|..:|...|..:.:|.|||||||.||..|:.||.:|:..:|.:
Mouse    61 ----------------KAPTKKSPLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWV 109

  Fly   169 GHDRRLSKYETLQMAQAYIGDLVTLLSRD 197
            ..|.:|||.:||::|.:||..|..:|:.|
Mouse   110 PPDTKLSKLDTLRLASSYIAHLRQILAND 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 26/62 (42%)
Tcf21NP_035675.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..88 19/107 (18%)
bHLH_TS_TCF21_capsulin 77..140 CDD:381547 27/62 (44%)

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