DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and Scx

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:XP_006520723.1 Gene:Scx / 20289 MGIID:102934 Length:232 Species:Mus musculus


Alignment Length:116 Identity:37/116 - (31%)
Similarity:60/116 - (51%) Gaps:4/116 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 QANPLGKNQGRSPRYWNKQQRSKPYDKLSTSMSSSTSSASS--SSSSSAGFGGEVLK--KRRLAA 143
            :.:||.:::.|........::..........:..:...|..  ::.|..|.||...:  ::|..|
Mouse    19 EVSPLSEDEDRGSESSGSDEKPCRVHAARCGLQGARRRAGGRRAAGSGPGPGGRPGREPRQRHTA 83

  Fly   144 NARERRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLL 194
            |||||.|.||:|.||..||.::|:...||:|||.|||::|.:||..|..:|
Mouse    84 NARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVL 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 31/65 (48%)
ScxXP_006520723.1 bHLH_TS_scleraxis 76..143 CDD:381521 29/59 (49%)

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