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Protein Alignment amos and lin-32
DIOPT Version :9
Sequence 1: | NP_477446.1 |
Gene: | amos / 35110 |
FlyBaseID: | FBgn0003270 |
Length: | 198 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_508410.2 |
Gene: | lin-32 / 191703 |
WormBaseID: | WBGene00003018 |
Length: | 142 |
Species: | Caenorhabditis elegans |
Alignment Length: | 144 |
Identity: | 50/144 - (34%) |
Similarity: | 73/144 - (50%) |
Gaps: | 38/144 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 76 EQQQHHL-QANPLGKNQGRSPRYWNKQQRSKPYDKLSTSMSSSTSSASSSSSS-----SAGFGG- 133
||.|.:: |.:|....|| .:.::|::...|.:.|..| |...||
Worm 4 EQYQMYVPQCHPSFMYQG----------------SIQSTMTTPLQSPNFSLDSPNYPDSLSNGGG 52
Fly 134 ---------------EVLKKRRLAANARERRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMA 183
::|:.||.|||.|||||||:||.|:|:||:|:|.:...::|||:||||||
Worm 53 KDDKKKCRRYKTPSPQLLRMRRSAANERERRRMNTLNVAYDELREVLPEIDSGKKLSKFETLQMA 117
Fly 184 QAYIGDLVTLLSRD 197
|.||..|..:|.:|
Worm 118 QKYIECLSQILKQD 131
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
amos | NP_477446.1 |
HLH |
137..195 |
CDD:238036 |
33/57 (58%) |
lin-32 | NP_508410.2 |
HLH |
73..124 |
CDD:278439 |
32/50 (64%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C160167232 |
Domainoid |
1 |
1.000 |
68 |
1.000 |
Domainoid score |
I6373 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4395 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0003687 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR19290 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2611 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
8 | 7.870 |
|
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