DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and Nhlh1

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_035046.1 Gene:Nhlh1 / 18071 MGIID:98481 Length:133 Species:Mus musculus


Alignment Length:172 Identity:41/172 - (23%)
Similarity:74/172 - (43%) Gaps:52/172 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LSNDTFQ-QLEQLMYQQEFSTSDSQS----DGANSCSLEMYYDTPSVLELEHMLNAQEQQQHHLQ 83
            |::||.: .|.....:.|...||...    |||.|       ..|.|::              ::
Mouse     3 LNSDTMELDLPPTHSETESGFSDCGGGPGPDGAGS-------GDPGVVQ--------------VR 46

  Fly    84 ANPLGKNQGRSPRYWNKQQRSKPYDKLSTSMSSSTSSASSSSSSSAGFGGEVLKKRRLAANARER 148
            ::.||::..:..::.::::|.:  .:.:|:                        |.|.|...|||
Mouse    47 SSELGESGRKDLQHLSREERRR--RRRATA------------------------KYRTAHATRER 85

  Fly   149 RRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDL 190
            .|:.:.|.||.:||.::|:|..|::|||.|.|::|..||..|
Mouse    86 IRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYL 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 24/59 (41%)
Nhlh1NP_035046.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..78 18/121 (15%)
bHLH_TS_HEN1 61..132 CDD:381544 26/93 (28%)

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