DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and Neurog1

DIOPT Version :9

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_035026.1 Gene:Neurog1 / 18014 MGIID:107754 Length:244 Species:Mus musculus


Alignment Length:166 Identity:54/166 - (32%)
Similarity:68/166 - (40%) Gaps:33/166 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 EFSTSDSQSDGANSCSLEMYYDTPSVLELEHMLNAQEQQQHHLQANPLGKNQGRSPRYWNKQQRS 104
            |...||.....:||.|     |..|.|       ..|:....||  ||....|.|.    ..:||
Mouse     6 ETCISDLDCSSSNSSS-----DLSSFL-------TDEEDCARLQ--PLASTSGLSV----PARRS 52

  Fly   105 KPYDKLSTSMSSSTSSASSSSS------SSAGFGGEVL-----KKRRLAANARERRRMNSLNDAF 158
            .|    :.|.:|:...|.....      ..|....|.|     :.||:.||.|||.||::||.|.
Mouse    53 AP----ALSGASNVPGAQDEEQERRRRRGRARVRSEALLHSLRRSRRVKANDRERNRMHNLNAAL 113

  Fly   159 DKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLL 194
            |.||.|:||...|.:|:|.|||:.|..||..|...|
Mouse   114 DALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETL 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 HLH 137..195 CDD:238036 29/58 (50%)
Neurog1NP_035026.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 8/25 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..82 10/50 (20%)
HLH 91..150 CDD:238036 29/59 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835468
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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