DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and ngn-1

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_500236.1 Gene:ngn-1 / 177045 WormBaseID:WBGene00003595 Length:184 Species:Caenorhabditis elegans


Alignment Length:49 Identity:14/49 - (28%)
Similarity:21/49 - (42%) Gaps:13/49 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GLGIYRKITIRGRMTH-----DQFNINLQTGPNTNPRDDTA-LHISIRP 62
            |:|       ||.|.|     ||.::|..|.|..|...:.. :.:.:||
 Worm  1601 GMG-------RGNMIHQNITVDQSHLNGLTMPQGNQATEKGEIAVPVRP 1642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558
ngn-1NP_500236.1 bHLH_SF 63..119 CDD:469605
Blue background indicates that the domain is not in the aligned region.

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