Protein Alignment amos and Msc

DIOPT Version :10

• Sequence 1: NP_477446.1
• Gene: amos / 35110
• FlyBaseID: FBgn0003270
• Length: 198
• Species: Drosophila melanogaster
• Sequence 2: NP_001398640.1
• Gene: Msc / 17681
• MGIID: 1333884
• Length: 238
• Species: Mus musculus
• Alignment Length: 164
• Identity: 46/164 - (28%)
• Similarity: 73/164 - (44%)
• Gaps: 24/164 - (14%)

  Fly    45 DSQSDGANSCSLEMYYDTPS-----VLELEH------MLNAQEQQQHHLQANPLGKNQGRSPRYW 98
            ||:..|     |:..|..|:     :|.:|.      .:::.|::....:...||...|
Mouse    11 DSEMRG-----LQRVYPAPASKRPPLLRMERGYGSPSDISSAEEEDGEEEPGSLGAAGG------ 64

  Fly    99 NKQQRSKPYDKLSTSMSSSTSSASSSSSSSAGFGGEVLKKRRLAANARERRRMNSLNDAFDKLRD 163
            .|::|.:..|  :.........|........|...|..:.:|.|||||||.||..|:.||.:|:.
Mouse    65 CKRKRLRGAD--AGGAGGRAGGAGKKPLPPKGSAAECKQSQRNAANARERARMRVLSKAFSRLKT 127

  Fly   164 VVPSLGHDRRLSKYETLQMAQAYIGDLVTLLSRD 197
            .:|.:..|.:|||.:||::|.:||..|..||..|
Mouse   128 SLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQED 161

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
amos	NP_477446.1	bHLH_TS_amos_like	132..195	CDD:381558	27/62 (44%)
Msc	NP_001398640.1	bHLH_TS_musculin	100..165	CDD:381546	28/62 (45%)