DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and Ascl2

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_032580.2 Gene:Ascl2 / 17173 MGIID:96920 Length:263 Species:Mus musculus


Alignment Length:164 Identity:50/164 - (30%)
Similarity:67/164 - (40%) Gaps:39/164 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 DGANSCSLEMYYDTPSVLELEHMLNAQEQQQHHLQANPLGKNQ-----GRSPRYW---------- 98
            :|||      .:..|..:..||...|..:    |.|...|.|.     |..||..          
Mouse    34 EGAN------VHFPPHPVPREHFSCAAPE----LVAGAQGLNASLMDGGALPRLMPTSSGVAGAC 88

  Fly    99 --NKQQRSKPYDKLSTSMSSSTSSASSSSSSSAGFGGEVLKKRRLAANARERRRMNSLNDAFDKL 161
              .::|.|....:.|....|..:.|||||::.|         ||   |.|||.|:..:|..|..|
Mouse    89 AARRRQASPELLRCSRRRRSGATEASSSSAAVA---------RR---NERERNRVKLVNLGFQAL 141

  Fly   162 RDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLLS 195
            |..||..|.:::|||.|||:.|..||..|..||:
Mouse   142 RQHVPHGGANKKLSKVETLRSAVEYIRALQRLLA 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 25/62 (40%)
Ascl2NP_032580.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..126 10/33 (30%)
bHLH_TS_ASCL2_Mash2 128..180 CDD:381586 21/48 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..248
Blue background indicates that the domain is not in the aligned region.

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