DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and Fer1

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:XP_321678.6 Gene:Fer1 / 1281726 VectorBaseID:AGAMI1_007596 Length:299 Species:Anopheles gambiae


Alignment Length:231 Identity:61/231 - (26%)
Similarity:99/231 - (42%) Gaps:62/231 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LMEQFYFPDEAPAIPEFLSNDTFQQLEQLMYQQEFSTSDSQSDGANSCSLEMYYDTPSVLELEHM 71
            :|.:..|  |.|::.:..|......|:|...||:......|.                  .|.| 
Mosquito    12 VMSRHLF--EGPSVHQHQSQQPLHHLQQHSCQQQQQQQQQQH------------------HLHH- 55

  Fly    72 LNAQEQQQHHLQANPLGKNQGRSPRYWNKQQRSKPYDK-----LSTSMSSSTSSAS--------- 122
             :..:||||||.::....:..|....::...:|..:.:     .:.::.|:||::|         
Mosquito    56 -HHHQQQQHHLDSDQQLSSHHRHQHDYHSDTQSHDHHQQHHLHQANNVDSTTSNSSDFFLADDEN 119

  Fly   123 -SSSSSSAGF--------------GGEVLKKR-----------RLAANARERRRMNSLNDAFDKL 161
             :.|.|..||              |....|.|           |.|||.||||||.|:|:||:.|
Mosquito   120 TTDSESYCGFNSDQENNDSMKDMYGNRTSKYRRPKCASQQAQQRQAANLRERRRMQSINEAFEGL 184

  Fly   162 RDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLLSRD 197
            |..:|:|.:::||||.:||::|.:||..|..:|.:|
Mosquito   185 RTHIPTLPYEKRLSKVDTLKLAISYISFLGEMLRKD 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 31/73 (42%)
Fer1XP_321678.6 None

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