DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and LOC1278135

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:XP_317677.4 Gene:LOC1278135 / 1278135 VectorBaseID:AGAMI1_006924 Length:310 Species:Anopheles gambiae


Alignment Length:219 Identity:83/219 - (37%)
Similarity:105/219 - (47%) Gaps:54/219 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NELMEQFY------FPDEAPAIPEFLSNDT------------FQQLEQLMYQQEFSTSDSQSDGA 51
            |...|.:|      |....|.:|.:...:|            :|:.|:.......|.|.:....|
Mosquito   120 NASCESYYSYANNNFKTACPTVPRYGMTETSTTSERPVLLNNYQKREESTQPLASSQSHALQSSA 184

  Fly    52 NSCSLEMYYDTPSVLELEHMLNAQEQQQHHLQAN--------PLGKNQGRSPRYWNKQQRSKPYD 108
            .:|.......|.:              |||..|.        |:.:|:. ||.:           
Mosquito   185 TTCGTAKRPVTVA--------------QHHPIAGSYYNPYTVPIARNRA-SPTH----------- 223

  Fly   109 KLSTSMSSSTSSASSSSSSSAGFGGEVLKKRRLAANARERRRMNSLNDAFDKLRDVVPSLGHDRR 173
              |:|.|.|.:.:.||..|......||:|||||||||||||||||||||||:|||||||||:||:
Mosquito   224 --SSSSSVSPTPSQSSGQSVVVVQPEVVKKRRLAANARERRRMNSLNDAFDRLRDVVPSLGNDRK 286

  Fly   174 LSKYETLQMAQAYIGDLVTLLSRD 197
            |||:|||||||.||..|..|||||
Mosquito   287 LSKFETLQMAQTYIAALNELLSRD 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 50/62 (81%)
LOC1278135XP_317677.4 None

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