DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and HLH54F

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:XP_308637.5 Gene:HLH54F / 1269982 VectorBaseID:AGAMI1_011263 Length:310 Species:Anopheles gambiae


Alignment Length:95 Identity:32/95 - (33%)
Similarity:45/95 - (47%) Gaps:9/95 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 KQQRSKPYDKLSTSMSSSTSSASSSSSSSAGFGGEVLKKRRLAANARERRRMNSLNDAFDKLRDV 164
            |:..|..:|.|........||......:..         :|.|||||||.||..|:.||..|:..
Mosquito     5 KKAPSPKFDLLEDGFDDDFSSNDDKPGTPI---------QRNAANARERARMRVLSKAFFNLKRN 60

  Fly   165 VPSLGHDRRLSKYETLQMAQAYIGDLVTLL 194
            :|.:..|.:|||.:||::|:.||..|...|
Mosquito    61 IPWVPADTKLSKLDTLRLAKNYITYLAATL 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 26/63 (41%)
HLH54FXP_308637.5 None

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