DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and Neurod4

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_031527.1 Gene:Neurod4 / 11923 MGIID:108055 Length:330 Species:Mus musculus


Alignment Length:155 Identity:49/155 - (31%)
Similarity:68/155 - (43%) Gaps:31/155 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 EMYYDTPSVLELEHMLNAQEQQQHHLQANPLGKNQGRSPRYWNKQQRSKP--YDKLSTSMSSSTS 119
            :||..:..::||   :|.|...           ::|.|.:...|:|..:|  |..|.|......|
Mouse     3 KMYMKSKDMVEL---VNTQSWM-----------DKGLSSQNEMKEQERRPGSYGMLGTLTEEHDS 53

  Fly   120 SASSSSSSSAG----FGGEVLKK-----------RRLAANARERRRMNSLNDAFDKLRDVVPSLG 169
            ..........|    ..|...||           ||:.||||||.||:.||||.|.||.|:|...
Mouse    54 IEEDEEEEEDGDKPKRRGPKKKKMTKARLERFRARRVKANARERTRMHGLNDALDNLRRVMPCYS 118

  Fly   170 HDRRLSKYETLQMAQAYIGDLVTLL 194
            ..::|||.|||::|:.||..|..:|
Mouse   119 KTQKLSKIETLRLARNYIWALSEVL 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 33/74 (45%)
Neurod4NP_031527.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..80 13/56 (23%)
bHLH_TS_NeuroD4_ATOH3 59..145 CDD:381564 34/85 (40%)
Neuro_bHLH 146..263 CDD:463621
Blue background indicates that the domain is not in the aligned region.

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