DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment amos and Neurod6

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_033847.1 Gene:Neurod6 / 11922 MGIID:106593 Length:337 Species:Mus musculus


Alignment Length:61 Identity:33/61 - (54%)
Similarity:41/61 - (67%) Gaps:0/61 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 EVLKKRRLAANARERRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLL 194
            |.:|.||..||||||.||:.||||.|.||.|||.....::|||.|||::|:.||..|..:|
Mouse    90 ERVKFRRQEANARERNRMHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEIL 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 33/61 (54%)
Neurod6NP_033847.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..80
Nuclear localization signal. /evidence=ECO:0000255 80..86
bHLH_TS_NeuroD6_ATOH2 82..151 CDD:381565 33/61 (54%)
Neuro_bHLH 153..272 CDD:463621
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.