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Protein Alignment amos and neurod6a
DIOPT Version :9
Sequence 1: | NP_477446.1 |
Gene: | amos / 35110 |
FlyBaseID: | FBgn0003270 |
Length: | 198 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017209288.1 |
Gene: | neurod6a / 114414 |
ZFINID: | ZDB-GENE-010608-1 |
Length: | 391 |
Species: | Danio rerio |
Alignment Length: | 169 |
Identity: | 47/169 - (27%) |
Similarity: | 72/169 - (42%) |
Gaps: | 38/169 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 48 SDGANSCSLEMYYDTPSVLELEHMLNAQEQQQHHLQANPLGKNQGRSPRYWNKQQRSKPYDKLST 112
|..:.|..|.:.::.|.:::.:...| ...:.:|..:| |||: |::|..|
Zfish 58 SYSSKSTMLTLPFEDPVIMDTQFGAN--------FPRDCVGDLKG------NKQE---PFEKEET 105
Fly 113 SMSSSTSSASSSSSSSAGFGGEV---------------------LKKRRLAANARERRRMNSLND 156
.........|.........|.:. :|.||:.||||||.||:.||:
Zfish 106 LSHVMDDDDSEKDEDEREDGQDENGLPRRRGPRKKKMTKARVDRVKVRRMEANARERNRMHGLNN 170
Fly 157 AFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLLS 195
|.|.||.|||.....::|||.|||::|:.||..|..:||
Zfish 171 ALDSLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILS 209
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
amos | NP_477446.1 |
HLH |
137..195 |
CDD:238036 |
30/57 (53%) |
neurod6a | XP_017209288.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170578662 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2611 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.870 |
|
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