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Protein Alignment amos and neurog3
DIOPT Version :9
Sequence 1: | NP_477446.1 |
Gene: | amos / 35110 |
FlyBaseID: | FBgn0003270 |
Length: | 198 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_571890.1 |
Gene: | neurog3 / 114411 |
ZFINID: | ZDB-GENE-010608-4 |
Length: | 208 |
Species: | Danio rerio |
Alignment Length: | 123 |
Identity: | 39/123 - (31%) |
Similarity: | 57/123 - (46%) |
Gaps: | 27/123 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 87 LGKNQGRSPRYWNK----------QQRSKP--YDKLSTSMSSSTSSASSSSSSSAGFGGEVLKK- 138
:|:| |.....|:. ..:|:| |::.:...|...|.......:|.| .|||
Zfish 10 VGRN-GTFKSNWSSASEPKFGSTDMTKSQPIKYNREAELASKEWSFTFREDKTSNG----KLKKL 69
Fly 139 ---------RRLAANARERRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYI 187
||:.||.|.|.||::||.|.|.||.|:|:...|.:|:|.|||:.|:.||
Zfish 70 MSTSRQRGNRRVKANDRGRHRMHNLNSALDNLRSVLPTFPDDAKLTKIETLRFARNYI 127
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
amos | NP_477446.1 |
HLH |
137..195 |
CDD:238036 |
27/61 (44%) |
neurog3 | NP_571890.1 |
HLH |
84..135 |
CDD:197674 |
22/44 (50%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170578690 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
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