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Protein Alignment amos and atoh1c
DIOPT Version :9
Sequence 1: | NP_477446.1 |
Gene: | amos / 35110 |
FlyBaseID: | FBgn0003270 |
Length: | 198 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_003199618.1 |
Gene: | atoh1c / 100498672 |
ZFINID: | ZDB-GENE-090805-1 |
Length: | 204 |
Species: | Danio rerio |
Alignment Length: | 131 |
Identity: | 52/131 - (39%) |
Similarity: | 71/131 - (54%) |
Gaps: | 28/131 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 75 QEQQQHHLQANPLGKNQGRSPRYWNKQQRSKPYDKLS-----------TSMSSSTSSASSSSSSS 128
:|..:.|.:..| ::|..|.::|.. |:.| |.:|.|:...||.:.:.
Zfish 14 RETDRSHSEQCP------KAPMGWREEQLQ---DRASCDPCALVQLRLTGLSYSSEEQSSIARAR 69
Fly 129 AGFGGEVLKKRRLAANARERRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTL 193
::|||||||||||||..||.|||:||.|:|::..||:|||.|||||||.||..|..|
Zfish 70 --------RRRRLAANARERRRMLGLNVAFDRLRSVIPNVESDRKLSKSETLQMAQIYISTLSEL 126
Fly 194 L 194
|
Zfish 127 L 127
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
amos | NP_477446.1 |
HLH |
137..195 |
CDD:238036 |
39/58 (67%) |
atoh1c | XP_003199618.1 |
HLH |
87..129 |
CDD:197674 |
26/41 (63%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170578684 |
Domainoid |
1 |
1.000 |
77 |
1.000 |
Domainoid score |
I8781 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4395 |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
77 |
1.000 |
Inparanoid score |
I5240 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0003687 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR19290 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
8 | 7.890 |
|
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