DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and LOC100493338

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:XP_002937913.2 Gene:LOC100493338 / 100493338 XenbaseID:XB-GENE-29081655 Length:206 Species:Xenopus tropicalis


Alignment Length:103 Identity:39/103 - (37%)
Similarity:52/103 - (50%) Gaps:21/103 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 SMSSSTSSASSSSSSSAGFGGE---------------------VLKKRRLAANARERRRMNSLND 156
            |.:....|.|.||..|.|.|.|                     .:.|:|.|||||||.|.:|:|.
 Frog    56 SDAEDLESVSDSSDKSLGGGDEGGCCSPAEESRGKRKRKSRLSGVSKQRQAANARERDRTHSVNT 120

  Fly   157 AFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLL 194
            ||..||.::|:...||:|||.|||::|.:||..|..:|
 Frog   121 AFTALRTLIPTEPADRKLSKIETLRLASSYISHLANIL 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 32/84 (38%)
LOC100493338XP_002937913.2 bHLH_TS_scleraxis_like 104..158 CDD:381471 28/53 (53%)

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