DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and ascl1

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:XP_002944648.3 Gene:ascl1 / 100490701 XenbaseID:XB-GENE-1032967 Length:199 Species:Xenopus tropicalis


Alignment Length:140 Identity:40/140 - (28%)
Similarity:64/140 - (45%) Gaps:24/140 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LEHMLNAQEQQQHHL----------QANPLGKNQGRSPRYWNKQQRSKPYDKLSTSMSSSTSSAS 122
            :|..|:.|:||||.|          |.:|..:::...|:...:|:.|.|           .....
 Frog     9 MESNLSGQQQQQHFLQPACFFPQNVQLSPAEEHEAAKPKQIKRQRSSSP-----------ELMRC 62

  Fly   123 SSSSSSAGFGGEVLKKRRLAA---NARERRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQ 184
            ....:..|||..:.:::..|.   |.|||.|:..:|..|..||:.||:...::::||.|||:.|.
 Frog    63 KRRLNFTGFGYSLPQQQPAAVARRNERERNRVKLVNLGFATLREHVPNGAANKKMSKVETLRSAV 127

  Fly   185 AYIGDLVTLL 194
            .||..|..||
 Frog   128 EYIRALQQLL 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 24/66 (36%)
ascl1XP_002944648.3 bHLH_TS_ASCL1_Mash1 78..148 CDD:381585 23/60 (38%)

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