DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and tcf21

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_001103518.1 Gene:tcf21 / 100126209 XenbaseID:XB-GENE-484805 Length:179 Species:Xenopus tropicalis


Alignment Length:140 Identity:43/140 - (30%)
Similarity:67/140 - (47%) Gaps:8/140 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 TPSVLELEHMLNAQEQQQHHLQANPLGKNQGRSPRYWNKQQRSKPYDKLSTSMSSSTS----SAS 122
            |.|:.::|.....:..:...::.:| .|..|.|.   :..:.|...|..|......||    .|.
 Frog     3 TGSLSDVEDFQEVEMLECDGIKLDP-NKEFGISN---DSNEESSTCDNGSPKKGRGTSGKRRKAP 63

  Fly   123 SSSSSSAGFGGEVLKKRRLAANARERRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYI 187
            |..|.......|..:.:|.|||||||.||..|:.||.:|:..:|.:..|.:|||.:||::|.:||
 Frog    64 SKKSPLGNINQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYI 128

  Fly   188 GDLVTLLSRD 197
            ..|..:|:.|
 Frog   129 AHLRQILAND 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 26/62 (42%)
tcf21NP_001103518.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..87 17/67 (25%)
bHLH_TS_TCF21_capsulin 77..140 CDD:381547 27/62 (44%)

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