DRSC/TRiP Functional Genomics Resources

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Protein Alignment amos and scxa

DIOPT Version :10

Sequence 1:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_001076538.2 Gene:scxa / 100034489 ZFINID:ZDB-GENE-060503-414 Length:204 Species:Danio rerio


Alignment Length:125 Identity:40/125 - (32%)
Similarity:56/125 - (44%) Gaps:37/125 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 YDKLSTSMSSSTSSASSSSS---------------------SSAGFGGEVLK------------- 137
            |..:|.......:.:.||.|                     ||.|.||.::.             
Zfish    16 YSDISMMSEDDENGSESSGSDDRSFHLDTSGYDLKVGRKRKSSVGGGGRLIGVTPTIPTGTIGHV 80

  Fly   138 ---KRRLAANARERRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLL 194
               ::|.|||||||.|.||:|.||..||.::|:...||:|||.|||::|.:||..|..:|
Zfish    81 PEIRQRNAANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVL 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 32/79 (41%)
scxaNP_001076538.2 bHLH_TS_scleraxis 82..149 CDD:381521 30/59 (51%)

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