DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15160 and AT5G65180

DIOPT Version :10

Sequence 1:NP_001286047.1 Gene:CG15160 / 35109 FlyBaseID:FBgn0032688 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_569007.1 Gene:AT5G65180 / 836642 AraportID:AT5G65180 Length:439 Species:Arabidopsis thaliana


Alignment Length:477 Identity:112/477 - (23%)
Similarity:186/477 - (38%) Gaps:120/477 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTETFDEELFETRLEALKDTQEGIQQMSNWCLQHRSNHKKIIQCWLNVFKRVRVDHRLVLFYLAN 65
            |:..|.||:....|..|..||:.||.:|.||:.|||..:.::..|...|...::..::.|.||||
plant     1 MSSPFSEEILIDNLAKLNSTQQSIQTLSQWCIVHRSEAELVVTTWEKQFHSTQIGQKVPLLYLAN 65

  Fly    66 DVIQYSKRKRYEFV-ECWAT---ALQRATTMVRDERVKDKILRIFKIWEQREIY--NEEYLSDLS 124
            |::|.|||:..||| |.|..   ||:...:: .|:..|..:.|:..|||:|.::  ..:.|.|:.
plant    66 DILQNSKRQGNEFVQEFWKVLPGALKDIVSL-GDDYGKGVVSRLVNIWEERRVFGSRSKSLKDVM 129

  Fly   125 GLLNIAPPKKSQVDVSDE-FQNATLIAQVRECVELAEITDKSMQKLPKPPTFEIEVIKQQLKDKS 188
             |...|||   .:|||.: |:.:                 ||.::..|           ..|.|.
plant   130 -LSEEAPP---PLDVSKKRFRGS-----------------KSAKRDSK-----------STKTKL 162

  Fly   189 HSGNIEKEVERCVAFINAYNKNLQNEIKSRKAVLASI--------------------EAAKKFYE 233
            .||.:.:::......:.|.|.|.:.|:...|:.:..|                    ..||:..|
plant   163 SSGGVSEKIVSAFNLVRAENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEE 227

  Fly   234 HQG------KEVKVVASAYKSFGTRIKIVKRKLDETIPNLASPIPSPDVNAPSPERDADLQLPEE 292
            .:.      :::|.|..:..|....::...|:.:..:.||.|.|   .|.....|...::|....
plant   228 EENILRQSVEKLKSVEESRTSLVNHLREALREQESELENLQSQI---QVAQEQTEEAQNMQKRLN 289

  Fly   293 NNIPLNLFGGSINGFTSYLDGGKLPFDINDFKRDSKDRGSAIEVIGSRSDDEAYVPSANFYKPEP 357
            |..|:|    :.|| ||.......|..|          .:..|::.|.::....:.|.       
plant   290 NETPVN----NNNG-TSGQSAKITPASI----------AAMAEMLTSSTNSSMIMHSV------- 332

  Fly   358 ISS--ADSSSIPGLGGSAVYTPDAPLFGSNSQDQYVPPPPSHLYGDNGNGGSSGGPSDQY----- 415
            :||  |:::...||..|.....:|.:...|.|..::.|.|:              .|.|:     
plant   333 LSSFAAEATQTSGLTKSNTSDTNAFVVPPNPQQYHIIPNPA--------------ASQQFPYGFG 383

  Fly   416 -----TPAPMPPPP---LPPSL 429
                 .|..:||||   |||.:
plant   384 NIPLMPPGALPPPPPGTLPPHM 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15160NP_001286047.1 CID_RPRD_like 7..127 CDD:340778 42/125 (34%)
AT5G65180NP_569007.1 CID_RPRD_like 7..130 CDD:340778 42/124 (34%)
Smc <169..>288 CDD:440809 20/121 (17%)

Return to query results.
Submit another query.